Gene RPD_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3923 
Symbol 
ID4024439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4363017 
End bp4363487 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content70% 
IMG OID637964127 
Producthypothetical protein 
Protein accessionYP_571045 
Protein GI91978386 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0786582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCT TTTCGCTTCT GCTCGGTGTC GCCGCTTCGC TGCTCGTCAG CGCTGCCCAT 
GCGCAGCAGT CGCGCGTGCG CGTCGGTGTG CTGGAATGTC GCGGCGGCGC CAGCACGGGC
TTCATCGTCG GCTCGGTGAC CAATCTCGGC TGCGTGCTGC GCTCCGAAGG CCGTCCCGAC
ACGCCCTATG TCGCCACCAT CCGCAAGATC GGCCTCGACA TTGGTATTAC CCAGGAGACG
GCGCTGGCCT GGGGCGTGTT CGCACCGGTC GATCGCTTCG GCCCCGGCGA TCTCGCCGGC
GACTACGCCG GCGCGCAGGG CTCGGCGTCG ATCGGCGTCG GCCTCGGCGC CAACGTCCTG
GTGGGCGGTT CGGCCAATTC GATCGCGCTG CAGCCGCTCA GCCTGCAGGG GCAAACCGGC
GTCAATATCG CGGTCGGCCT GCAGGAGCTG GAGCTGCGCC CCGGCCGCTA G
 
Protein sequence
MRRFSLLLGV AASLLVSAAH AQQSRVRVGV LECRGGASTG FIVGSVTNLG CVLRSEGRPD 
TPYVATIRKI GLDIGITQET ALAWGVFAPV DRFGPGDLAG DYAGAQGSAS IGVGLGANVL
VGGSANSIAL QPLSLQGQTG VNIAVGLQEL ELRPGR