| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3872 |
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| Symbol | |
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| ID | 4024388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4311744 |
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| End bp | 4313252 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964076 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_570994 |
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| Protein GI | 91978335 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0626194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTC ACGACTTCAC CCTGGGCGAC GTCTATCGCC GTAACGCGGC GCTGGTTCCG
GACCGCACCG CCTTCGTGTT CGACGGCCTC CGCGTCACCC ACCGCGAATA CCTCTCCCGG
ATCGAAAAGC TCGCGGCCGG CCTGCTACGA GAGAATGTCC GGCCGGGCGA CCGTGTTGCA
ATTCTATCGC AAAACTGCCC CGAAATGGTC GAACTGATCG GCGCGGTCGC CCTGATCGGT
GCGATCCTGC TGCCGGTGAA CTACCGGCTC AACGCCGAGG AAATCGGATT TGTGCTCGGC
GACGGCGCTC CGGTCGTGTT GATCGCCGGC GCCGACTATC GCGACATCGT GACCGGGCTG
CAGCCGTCGC TTGAAAGCGT CCGGCGCATC TTTGCGATCG GCAGCGATCC CGCCCCGTTC
ACGCCATTCG CCGAGCTCGC ATCGGACGAC GCCTTCGCGC CGCCGGAGGT CGCCGCGTCC
GACGGCTTCG TCATCATCCA CACCGCCGCC GTCGGCGGCA AACCGCGCGG CGCGCTGATC
TCGCAAGGCA ATCTTCTCAT CGCGCAGAGT TCGTTGATCG AGGCTTGGCG CCTCGGCGAG
CGCGACGTCA ATCTCGGCAT GTTGCCGCTA TTCCACGTCA CCGGCCTCGG GTTGATGCTG
ACGCTGCAAC AGGCCGGCGG CGCCAGCGTG ATCGCGGCGA AATTCGATCC GGCGCAGGCG
GCGCGCGATA TCGCAGCCGA GCAGGTGACG GTGATGGCGG AGTTCGCACC GATGCTCGGC
AATGTTCTCG ATCAGGCCAA GCCGGAACAA TTAAAGAGTC TCCGCGCGGT CACTGGCCTC
GATACGCCGG AGACGATCGA GCGGTTCGAG AAAGCGTGCC CCCAGGCGAC GTTCTGGGCG
ACCTTCGGCC AGTCCGAGAC CTCGGGTCTG TCGACGTTCT CACCGTATCG CGACCGGCCG
AAATCTGCCG GGCGGCCGCT GTTCTGGCGC ACCGTCGCGG TGGTTGACGC CGACGACAAG
CCACTGCCGG CGGGTGAGGT CGGCGAGATC GTGCTGCGCG GTCCGACCGT GTTTAAAGGC
TACTGGAACA ACGAGGCAGC AACCAAGCAC GCCTTCCGCA ACGGCTGGCA CCATACCGGC
GACATGGGGC GGTTCGACGC TGACGGCTAT CTGTTCTACG CCGGCCGCGC CCCGGAGAAG
GAGTTGATCA AGACCGGCGG AGAGAACGTC TATCCGGCCG AGGTCGAAGG CGCGATCCGC
CAGCATCCGG CGATTGCGGA AGCTGTCGTG ATCGGCGTGC CCGATCCGCA ATGGAGCGAG
GCGATCAAGG CGGTGTGCGT CTGCCGTCCG GGTCACAGCG TCGGCGCCGA CGAGCTGGCC
GACTTCGTCG CCGGTCTGAT CGCACGCTAC AAAAAGCCGA AACAGGTGGT GTTCGTCGAC
GCGCTGCCGA AAACCGGCAA GGGCGAGATC GACCGCGCAG CGGTCAAGTC CGCCCACGGC
CAGGCTTAG
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| Protein sequence | MALHDFTLGD VYRRNAALVP DRTAFVFDGL RVTHREYLSR IEKLAAGLLR ENVRPGDRVA
ILSQNCPEMV ELIGAVALIG AILLPVNYRL NAEEIGFVLG DGAPVVLIAG ADYRDIVTGL
QPSLESVRRI FAIGSDPAPF TPFAELASDD AFAPPEVAAS DGFVIIHTAA VGGKPRGALI
SQGNLLIAQS SLIEAWRLGE RDVNLGMLPL FHVTGLGLML TLQQAGGASV IAAKFDPAQA
ARDIAAEQVT VMAEFAPMLG NVLDQAKPEQ LKSLRAVTGL DTPETIERFE KACPQATFWA
TFGQSETSGL STFSPYRDRP KSAGRPLFWR TVAVVDADDK PLPAGEVGEI VLRGPTVFKG
YWNNEAATKH AFRNGWHHTG DMGRFDADGY LFYAGRAPEK ELIKTGGENV YPAEVEGAIR
QHPAIAEAVV IGVPDPQWSE AIKAVCVCRP GHSVGADELA DFVAGLIARY KKPKQVVFVD
ALPKTGKGEI DRAAVKSAHG QA
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