| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3860 |
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| Symbol | |
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| ID | 4024376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4298738 |
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| End bp | 4299427 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964064 |
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| Product | ABC transporter related |
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| Protein accession | YP_570982 |
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| Protein GI | 91978323 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGCAA TCAACGATCT GCACGTCGCC TACGGCCAGA GCGAAGTGCT GCACGGGCTC
AACATCAACG TCGCGCCGAA CGAGATCGTC GCGATCATGG GCCGCAACGG CATGGGCAAG
ACCACGCTGA TGAAGTCGCT AATGGGCATT ATCCCGCAAC GGAGCGGCTC GATCTCAATG
GAAGGCGCCG AGCTCGGTGG TCTGAAGAGC TACGAGCGCG TCGGGAAGGG CCTCGCTTAC
GTGCCGCAGG GCCGGATGAT CTTCTCGACC ATGACGGTGA AGGAGAACAT CGAGACCGGC
CTCGTCGTGT CCGGCGAGCG CGAGGTCCCG CCCGATATTT ACGAGCTGTT CCCGGTGCTC
TTGGAGATGA AGGGCCGGCG CGGCGGCAAT TTGTCCGGCG GACAACAGCA GCAATTGGCG
ATCGCTCGCG CGCTCGCCAC CAGGCCGAAG GTGCTGCTGC TCGACGAGCC GACCGAAGGC
ATCCAGCCCT CGATAATCCG CGAGATGGCC CGCACGCTGA AGCGCATTCG CGACGGTCGC
GGCCTGTCGA TCATCGTCTC CGAGCAGGTG CTGAGTTTCG CGCTCGACGT CGCCGACCGC
GTGCTGGTGA TTGAGAACGG CGAAATCGTC CGCGACGAGG CCCGCGACAG CGTCGATGAG
GCGCAGGTCG CCAAATATCT GTCCGTCTGA
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| Protein sequence | MLAINDLHVA YGQSEVLHGL NINVAPNEIV AIMGRNGMGK TTLMKSLMGI IPQRSGSISM
EGAELGGLKS YERVGKGLAY VPQGRMIFST MTVKENIETG LVVSGEREVP PDIYELFPVL
LEMKGRRGGN LSGGQQQQLA IARALATRPK VLLLDEPTEG IQPSIIREMA RTLKRIRDGR
GLSIIVSEQV LSFALDVADR VLVIENGEIV RDEARDSVDE AQVAKYLSV
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