| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3838 |
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| Symbol | |
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| ID | 4024354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4276641 |
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| End bp | 4277468 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964042 |
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| Product | transglutaminase-like |
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| Protein accession | YP_570960 |
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| Protein GI | 91978301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0227022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCC GTGTCGGCTA CGAGATCACC TACGATTTTC CGCAGCCGAC GCCGATGCTG
ATCGTTTTGG GGACGCATTT CACCCGTGCG TCCGACGTTA TCGTGCCGGA TTACCTGACC
GTGGATCCGC CAGTCCCGAT CACGCCGTAT CGCGACATGT TCGGCAATTG GTGCAGCCGC
CTCGTCGCCC CTGCCGGCCG GACGCGGCTC GCGGCAGACG GCATCGTGCG CGACCTCGGC
GTGCCCGACC CGGTAGCGCC GTTGGCGATC CAGCACGCTG TCGAAGATCT GCCCGCTGAC
ACGATCGTCT ATTTGCTCGG CAGCCGCTAT TGCGAGACTG ACCTGTTGTC GGACATCGCC
TGGAAGATGT TCGAAACTAC GCCGCCGGGC TGGCCGCGGG TGCAGGCGAT CTGCGATTTC
GTCCACAATC ATATCGCGTT CGACTATCAG CACGCGCGCG CCACCCGTAC CGCGCATGAA
GCGTTCGACG AAGGCCGCGG CGTCTGCCGC GACTATGCGC ATCTGGCGAT CACGCTGTGT
CGCTGCATGA ACATTCCGGC GCGCTACTGC ACCGGCTATC TCGGCGATAT GGGCACGCCG
AAGCCTTGGG CTGCGGGCGA TTTCGCCGGC TGGTTCGAGG CTTATCTCGG CGGCCATTGG
CACACCTTCG ATCCGCGCAA CAACGTTCCT CGGCTCGGAC GGGTTCTGAT CGCGCAGGGT
CGCGACGCCG CCGACGTGCC GATCACCCAG ACCTTCGGTC CCAACACGCT GGTCAGCTTC
AAGGTCTGGA CCGACGAAAT CGACGACAGC GTCGCCGGAT TGCGCTGA
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| Protein sequence | MKLRVGYEIT YDFPQPTPML IVLGTHFTRA SDVIVPDYLT VDPPVPITPY RDMFGNWCSR
LVAPAGRTRL AADGIVRDLG VPDPVAPLAI QHAVEDLPAD TIVYLLGSRY CETDLLSDIA
WKMFETTPPG WPRVQAICDF VHNHIAFDYQ HARATRTAHE AFDEGRGVCR DYAHLAITLC
RCMNIPARYC TGYLGDMGTP KPWAAGDFAG WFEAYLGGHW HTFDPRNNVP RLGRVLIAQG
RDAADVPITQ TFGPNTLVSF KVWTDEIDDS VAGLR
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