Gene RPD_3835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3835 
Symbol 
ID4024351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4272420 
End bp4273115 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID637964039 
Productmethyltransferase type 12 
Protein accessionYP_570957 
Protein GI91978298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.100831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACT GGATCGACTA TTACGACTCC ACGCACACGA TCTATGTCAG CAAGCGCCAT 
CGCGACGTGC ATTTCGACGA GATCGCCCGA GATATCGTCG GCTACATCGG ATCCCCGGAC
GCAACGGTAC TGGATTATTC CTGCGGCGAA GCGCTGTCCG CTGCCAAGGT TGCGGCGGCC
TGCGGCACGC TGATCCTCGC CGAACCGGCA CCCGGCGTGC GCGGCCGGCT GAGCGTACGG
TTCGCTCATC ATCCGAACAT CAAGGTTCGT TCGCTGGACG ATCTGCAGCC GATGCCGAAC
GGCTCGCTGG ACCTCGTGGT GATAAACTCG GTCGCACAGT ACATGTCGCC GGCCGAGTTG
GATCAGACGC TAACGCTGAT CCGCCGGCTA TTGCGGCGCG GTGGAAAGCT GGTGCTCGGC
GACATCCTGC AGCCGCACGT CGGGATGAGC CGAGACGTGA TCGCGTTGCT GCGCCTCGCA
GCAAAGCACG GCTTCCTGCA GGACGCGCTG TGGGGACTGG CGCGGACCGC GCTGTCCGAC
TACCGGCAGC TCCGGACCAA AATCGGCCTT CAGCGTTACA GCGAAGCCGA GATTCTCGCC
AAGCTCGCCG CCGCGGGATT CGCCGCGATC CGCGCAGACG TCAATATCGG CCACAATCCA
TGGCGGATGA CCTTCATCGC GCGGCCCGCG AACTGA
 
Protein sequence
MDDWIDYYDS THTIYVSKRH RDVHFDEIAR DIVGYIGSPD ATVLDYSCGE ALSAAKVAAA 
CGTLILAEPA PGVRGRLSVR FAHHPNIKVR SLDDLQPMPN GSLDLVVINS VAQYMSPAEL
DQTLTLIRRL LRRGGKLVLG DILQPHVGMS RDVIALLRLA AKHGFLQDAL WGLARTALSD
YRQLRTKIGL QRYSEAEILA KLAAAGFAAI RADVNIGHNP WRMTFIARPA N