Gene RPD_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3800 
Symbol 
ID4024316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4239893 
End bp4240360 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content64% 
IMG OID637964004 
Producthypothetical protein 
Protein accessionYP_570922 
Protein GI91978263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTACT GGATCGTTGC ATTTACCGCC GCGCTAGTCG TGGTGATCGG CTATGCAGCC 
GGTCCCGTCG GCGCAGTGAT TTCACTGCTC GCGTTTGCGG GCTCATTGTA CCTGATGTGG
GCACGCAAGC TCGGCTTCAG CGGCGCGTGG ACGCGGTTCG GTCTCGATCG CTTCACGGCG
CCGTTCTGGA AGGGTGAAAA CTGGGAGCGC TTTAACGCAA TGTTCAGCGA CAGCGAAAGC
GTCGTGAAGG CCGGCACAAT CGCCGTGGCC CTGATCGCGC TGTCGCTGAT CCTGCCGGCA
AGCCAGGTCG GCCTGATCGC GCTGGTCGTG GCCGCCTGGT ACGCATTCGA AGTCTATCGC
AGCCAACGCC CGCTGGTGCG GCCGACGGTC GCGATCGAGT CGAAGCCGGC CGGCGACAAG
GTCATTTACG CCGCGGCGCC GCGGAGCGAA CCGGCCCAAA TGAACTGA
 
Protein sequence
MQYWIVAFTA ALVVVIGYAA GPVGAVISLL AFAGSLYLMW ARKLGFSGAW TRFGLDRFTA 
PFWKGENWER FNAMFSDSES VVKAGTIAVA LIALSLILPA SQVGLIALVV AAWYAFEVYR
SQRPLVRPTV AIESKPAGDK VIYAAAPRSE PAQMN