| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3794 |
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| Symbol | |
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| ID | 4024310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4235125 |
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| End bp | 4236360 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963998 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_570916 |
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| Protein GI | 91978257 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.257462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGACT TCCACGCCAC ACGACAGAGC GAACTGCGTG GCGGCGTGGC ACCCTGGGCG
GCCGGCCTGC GGCGGCCCAT CCGCCAGCCC TTGGCGCAGA ACATCACTGT CGACGTGCTG
ATCGTCGGCG CCGGGATCAC CGGTTCGATG ATGGCCGAAC ATCTGGCGCG CCCGGGGCGC
AGCCTCTGCA TCATCGATCG CGAGCGCCCC GGGTTCGGAA GCACCGCGGC ATCGACCGCG
ATGCTGGAAT GGGAAATCGA TCGATCGCTG ACCGAGCTGT CGGAGTTCTA CGGCTTCGAG
CGCGCCGCGG AAGTCTATCA GCTCAGCCTC GGCGCCGTCG CTGGGCTGTA CCGGTTGGCG
CATTCGCTGC AATTCTCCAG CGCGCTGCGA GCGCGTGACA CGGTCTATCT CGCCGCGGGC
GATCACGGCG CGCGCGAATT GCTGACCGAA CATGAACTGC GAAAACGCGC GGGGCTGCCC
GGCGCGTATC TCGATTATCG GACGCTGCGC AGCGAATACG GCTTCGATCG CGAGGCCGCG
ATCGTGTCGC CCGGCTCCGC CGAGGTCGAT CCACTCCTGC TGTCGCACGC GCTCCTCAGC
GCCGCCACGA CGCGGGGCGT CGCGGTGTTC GATGCCGAAG CCATCGCGTA TGACAACAGC
GGCGAACGGG TGATGGTTGC GACCGACCAT GGCTTCACCA TCGAAGCCGG GCACGTGGTT
CTCGCCACCG GCTACACGAT GCCGGACATT GTACAGTCCG ATCTGCACAA GACCGCGTCG
AGCTGGGTGG TGGCGACGCC GCCGCAGCCG CCCGATCGGC TGTGGCGCGA CAATGCGCTG
ATCTGGGAGG CGTCGAACGA TTATCTCTAT GCGCGCACCA CCGCCGAACA GCGTATCATC
ATCGGCGGCG AAGACGACGA CCAGGTCGTC GACCCGGATG CTCGCGACGC GCTGATGCCG
CGAAAGGCTG AAATCCTGCT CGACAAGCTT CACCTGCTGT GGCCGCAAGC ATTCCTGGTC
GCCGAATACA TCTGGTCGGG CGCGTTCGGC ACCACCAGCG ATGGATTGCC GCTGATCGGC
CCGGTGCCCG GACAATCGCG AATCTTCGCT GCCTATGGTT ATGGCGGCAA CGGCATCACC
TTCAGCTATC TCGCGAGCCG ACTGATCGGC CGGCTGCTCG ACGGCCAGAG GCCGTCGCAA
CTCGATCACT TCGCGCTGGA TCGCCGAGCG GTGTAG
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| Protein sequence | MDDFHATRQS ELRGGVAPWA AGLRRPIRQP LAQNITVDVL IVGAGITGSM MAEHLARPGR
SLCIIDRERP GFGSTAASTA MLEWEIDRSL TELSEFYGFE RAAEVYQLSL GAVAGLYRLA
HSLQFSSALR ARDTVYLAAG DHGARELLTE HELRKRAGLP GAYLDYRTLR SEYGFDREAA
IVSPGSAEVD PLLLSHALLS AATTRGVAVF DAEAIAYDNS GERVMVATDH GFTIEAGHVV
LATGYTMPDI VQSDLHKTAS SWVVATPPQP PDRLWRDNAL IWEASNDYLY ARTTAEQRII
IGGEDDDQVV DPDARDALMP RKAEILLDKL HLLWPQAFLV AEYIWSGAFG TTSDGLPLIG
PVPGQSRIFA AYGYGGNGIT FSYLASRLIG RLLDGQRPSQ LDHFALDRRA V
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