Gene RPD_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3782 
Symbol 
ID4024298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4222451 
End bp4223995 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content63% 
IMG OID637963986 
Productputative monooxygenase 
Protein accessionYP_570904 
Protein GI91978245 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0324515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAA TAGCCGAAAC CGACTCGTCA CGCGTCGCAC ACGACGTCAC CGCCCAATCG 
TCCCCCGAAG TCCAATCGTC CCCCGAACAT TTCGACGTCC TGATCGTCGG CGCCGGCATC
TCCGGCATCG GCGGAGCCTA TCATCTGACG TCGCAATGCG CCGGCACCAG CTTCGTCGTG
CTCGAGACGC AGGACTCCTT CGGGGGCACC TGGCTGACCC ACCGCTATCC CGGCATCCGC
TCCGACAGCG ATCTCTACAC CTTCGGTTAC CGCTTCAAGC CGTGGACCGG CAAGCCGATC
GCGACCGCGG CCGAAATTCG CGAATATATC GGCGAGGTGA TCACCGATAA CGATCTCGAC
CGCCACATCC GCTATCGCCA TCGCATCGTG TCTGCGAGCT GGTCGAGCGC TGCGAAGCGC
TGGACCATCG TGGCCGAGCG CACCGACACT GGCGAGACGG TCCGCTTCAC CGCCAATTTC
CTCTGGATGT GCCAGGGTTA TTATCGCCAC AGCGAGGGCT ATACGCCGGA ATGGGAGGGC
ATGGCGGATT TCAAGGGCCG CATCGTGCAT CCGCAGACCT GGCCTGACGA TCTCGATTAT
GCCGGCAAGA AGGTGGTGGT GATCGGCTCC GGGGCCACCG CGGCGACGCT GGTGCCGTCG
ATCGCGCCGG CCTGCGATCA CGTCACGGTG CTGCAGCGCT CGCCGACTTA CTTCATTCCG
GGCCGCAACA AGATCGAGAT CGCCGACACG CTGCGCGAAC TCGGCATCGC CGAGGAGTGG
ATCCACGAGA TCGTTCGCCG CAAGATCCTG TTCGACCAGG CCGCTTTCAC CCGGCGCTCA
ATGACCGAGC CGGATGTGGT GAAGCAGGAG CTGTTGTCGG GCGTGCGCGC CTTTCTCGGG
CCCGGCTACG ATCTCGATCC GCATTTCACG CCGACCTATC GACCGTGGCG CCAGCGCATC
GCCTTCGTGC CGGACGGCGA TCTGTTCAAG GGTATCGCCT CCGGCAAGGC GTCTGTGGTC
ACCGACGAGA TCGAGCGTTT TACAGAATCC GGGATCAAGC TGAAGTCCGG CGAGACGCTC
GCCGCCGACA TTGTGGTCAC CGCCACGGGC TTCAACCTCA ACGTTCTGGG CGATATCGCC
TTCAGCATAG ATGGCGAACC GCTCGATTTC GCCGACACCG TCACCTATCG GGGCATGATG
TTCACCGGCG TGCCGAACAT GGTCTGGGTG TTCGGCTATT TCCGCGCGAG CTGGACGCTG
CGCGCCGATC TCGTCGCCGA TTTCGTCTGC CGTTTGCTCG CCCACATGAA GCAGCGCGGC
TATCGCAGCG TGGCCCCGGC GCTACGCCCG GAAGACGCCG ATATGGCTTT GCTGCCCTGG
ATAGACCCCG AGAACTTCAA TCCGGGCTAC CTGATGCGGG GCATGAGCCT GTTGCCGAAG
CGCGGCGCCA AACCGGAGTG GCAGCACAGC CAGGACTATT GGACGGAAAA GGATGAACTG
CCGAACATCG ACCTCGACGA TCCTGCCTTC GTCTACACAG CCTGA
 
Protein sequence
MIRIAETDSS RVAHDVTAQS SPEVQSSPEH FDVLIVGAGI SGIGGAYHLT SQCAGTSFVV 
LETQDSFGGT WLTHRYPGIR SDSDLYTFGY RFKPWTGKPI ATAAEIREYI GEVITDNDLD
RHIRYRHRIV SASWSSAAKR WTIVAERTDT GETVRFTANF LWMCQGYYRH SEGYTPEWEG
MADFKGRIVH PQTWPDDLDY AGKKVVVIGS GATAATLVPS IAPACDHVTV LQRSPTYFIP
GRNKIEIADT LRELGIAEEW IHEIVRRKIL FDQAAFTRRS MTEPDVVKQE LLSGVRAFLG
PGYDLDPHFT PTYRPWRQRI AFVPDGDLFK GIASGKASVV TDEIERFTES GIKLKSGETL
AADIVVTATG FNLNVLGDIA FSIDGEPLDF ADTVTYRGMM FTGVPNMVWV FGYFRASWTL
RADLVADFVC RLLAHMKQRG YRSVAPALRP EDADMALLPW IDPENFNPGY LMRGMSLLPK
RGAKPEWQHS QDYWTEKDEL PNIDLDDPAF VYTA