| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3772 |
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| Symbol | |
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| ID | 4024288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4210128 |
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| End bp | 4211120 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963976 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_570894 |
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| Protein GI | 91978235 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.316114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0129317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCATG TGGTGAAAAT TCCAGTCCGT ATTGGTACGC GCAAGAGCGT GATGGCGCTT
GCCCAGACTG AGGACATCGC CAAGCAGCTG CGTGCAGCCG CGAGCGAACT CGACGTCGAA
ATCGTCAAGT TCGAGACCGT CGGCGACAGC GACCAGATCA GCAAGCTGTT GCCGCATGGC
GGCAAGGGCG GCGCTTTTGT CGCGGAAATC CGCGCCGCGG TGATCGCCGG CCAGCTTCAG
GCCGCGATGC ACTCGCTGAA GGACATGCCG GGCAACGAAG ACACCCCGGG TCTGGTGATC
GGCGCCACGC TGGCCCGTGA TCCGGCGACC GACGCGCTGG TGCTCCGCGA GGGCCTGACG
CTCGAGGAGC TGAAGAAATC GCGTGGCAAG GGCTACACCA TCGGCACCAA TGCGGTGCGG
CGCGCGGCCT ATGCCAAGCG GCTGTTCCCC GAGGTCAATG TGATCCACTT CCGCGGCGCG
GCCGACACCC GGATCCGCAA GCTCGACGCT CGCGAGAAAC AGCGGCTGCC CGATGGCGGC
GAGGTCGGCC CGGCCGACGC GCTGATCATG GCGCGCGCGG GGCTGGAGCG AGTCGGCTTC
GTCGACCGCA TCGTGCATGA CTTCACGCCG CAGGAAATGC TGCCGTCCGC AGGTCAGGGC
ATCGTCGCGG TCGAATGCGC GGTCGACGAT TGGCAGACCC GCCGCTATCT GGCGATGATC
GACGATCCAA AGTCGCGGCT GTGCTGCGAC GCTGAACGCG AGGTGCTTTG GGTGCTGAAC
GGCCACTGCA ATTCGCCGAT GGCGGCGCAT TCGACGGTCA ACGGCGCGGA AATGACCTTG
CACGCCTCGG TTCTCGATGA GGAAGGTGGT CTGTTCATCG AGACCACGCG CTCGGGTCCG
GCCAATCGGC CCCGCGAACT CGGCCGTGCG GTTGGCCTTG ATCTTCTGGA CAAGGGCGCC
GCCGCGGTCA TTGAAAAAAC GCGGCCGGAG TGA
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| Protein sequence | MEHVVKIPVR IGTRKSVMAL AQTEDIAKQL RAAASELDVE IVKFETVGDS DQISKLLPHG
GKGGAFVAEI RAAVIAGQLQ AAMHSLKDMP GNEDTPGLVI GATLARDPAT DALVLREGLT
LEELKKSRGK GYTIGTNAVR RAAYAKRLFP EVNVIHFRGA ADTRIRKLDA REKQRLPDGG
EVGPADALIM ARAGLERVGF VDRIVHDFTP QEMLPSAGQG IVAVECAVDD WQTRRYLAMI
DDPKSRLCCD AEREVLWVLN GHCNSPMAAH STVNGAEMTL HASVLDEEGG LFIETTRSGP
ANRPRELGRA VGLDLLDKGA AAVIEKTRPE
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