| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3710 |
|---|
| Symbol | |
|---|
| ID | 4024226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4142895 |
|---|
| End bp | 4143866 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637963914 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_570832 |
|---|
| Protein GI | 91978173 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.483452 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGAGC ATCGCAAAAA GCCCATCAGC GAAGATCAGG CGGGCGCCGG CGCTGCGTCA
GCCGCGTCGG ATGTTTCCAA GGTTTCTGCT GAAACCAACG AGACGCGGGC TGAGAACGCG
AGCGGTGAGG CCGCGGCGTC CGCCGAGCCG GCTGCCGAGA CCGCCAAGGA CGACGCGAAG
CCGGACACCG ATGCCGGGCG TCATATGCGC GTCGGGAAGG TCACGATCAT GGCGCCGGCG
CGCAATGAGA ACTTGTACCG CCATTGGGAC GACGAGATCG AGGTCGAAGC TCCGGACGAG
CCGAACGAGC AGGCGGCAAA GCCCCATGGC AAGCGCCAGC TTGCGGTGGT CGCAGTCGCG
GTGATCCTGG CCGCGATCGC CGGTGCTGCC GGTGGCGCGC TGACGAGCGC CGGCTTTGCG
CAATACGGCG ACAATGCGAA TGCCGCATCG CAAGCACAGT CGCAGGCGCG TGCGCTGGAC
GAGCAGGTCG CAAAGCTGCA GACCGAACTC GCCGCGCTGA AGGCGAGTGT CGATCGGGCC
GACAAGGCTG CGGTTGCCCA GATCAGCAAG GCGAGCGATC GCCTCGACAA GATCGAGAAG
GCGCAGGCCG AGCCCGCGCA GAAGATCGCC AAGTTGAGCG AGACCGTCGA GAAGCTGCGC
ACCGCGCAAG CCGAGAAGCC GGCGCCTGCT CCGGCCCCTG CGCAGGTCGC GTCCGCTGCT
CCGCAGGACG TCACCGGCTC GGTGTCGCCG AAGCCTGCGA CGAAGCAAAA CGACGTCGGC
CGGCTGCCGA CGGTCGAAGG TTGGGTGGTG CGCGACGTGT ATGACGGCGG CGCGGTGATC
GTCGGCCGCC AGGGCACGTT CGAGGTTTAT GCCGGCGACC CGGTGCCGGG CCTCGGCCGC
GTCGATGCGA TCCGCCGCCA GGATGGACGC TGGGTTGTGG TCACGAGCCG CGGCCTGATC
GTCTCCCGCT GA
|
|---|
| Protein sequence | MDEHRKKPIS EDQAGAGAAS AASDVSKVSA ETNETRAENA SGEAAASAEP AAETAKDDAK
PDTDAGRHMR VGKVTIMAPA RNENLYRHWD DEIEVEAPDE PNEQAAKPHG KRQLAVVAVA
VILAAIAGAA GGALTSAGFA QYGDNANAAS QAQSQARALD EQVAKLQTEL AALKASVDRA
DKAAVAQISK ASDRLDKIEK AQAEPAQKIA KLSETVEKLR TAQAEKPAPA PAPAQVASAA
PQDVTGSVSP KPATKQNDVG RLPTVEGWVV RDVYDGGAVI VGRQGTFEVY AGDPVPGLGR
VDAIRRQDGR WVVVTSRGLI VSR
|
|---|
| |