| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3630 |
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| Symbol | |
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| ID | 4024144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4049364 |
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| End bp | 4052885 |
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| Gene Length | 3522 bp |
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| Protein Length | 1173 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637963834 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_570754 |
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| Protein GI | 91978095 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.890362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACAA CTCCTGAAAC GATCGCTGCA GACATCGAGG AAGCTGCGAC CGCCGGATTC
CGAGGAAACC TACTTGCTCG CGGGCAGGCC CGCGCGATCA TCTGGCGCGA CGGTGCCCTG
CCGGCCGAAG CGCCAGCCTT CGCCCCACAA CTGAGCTACG ATCTCCATTC CTATGCCTAT
GCTCTTCTAG GGCTTGCTCT CCGTCTCCGT GAGATCGGCG GCGATGCGGC CCGGGCCCGG
ATCGCGTTCG AGCAGGCGGC CACCGCCCTT GAAGCCGTAA TCTCGAAAGG GGACCGTCAG
GAGGTCGACC GAGACTTCCA CTTCGTGATG GCGGCAGCGA GCTATCATCT TGCGCATCTT
TCGGCGCGCG CATATTCGCT TCTTGCGACC GTCGATGCCG ACGAGAATTT TTCGCGCATC
GAAAGGGCGC TTGCACAGTT GATGCGGCGC AATTTCGAAG CCCTGCGTGC CGGTGTGCTC
GATTACCGAG CTTCGGCGAC GGGCTCCGAT GCCCGGATTG CCGCCGAATT CCAGGCACGA
CTGGATCAGC CTGAAGGCGC CGGCGATCCA GAGGCCCGCG GCGAGTTCAT CTTTGAGGGT
CTGGACGTGG CCCTGACCGA CGCATTCCTT TCGGCGATAT CAATGTTCGT TCTTGCACTG
GACCGGGGTG ACCGGTCGCT TGTAGATCAG GCGTTGGCCC GGCTCCGAGA AAACCTCTCG
ATATGCAGCG AACTGAACCT CCTGCCGCAG TGGTGGGCGC ACCGCCTGGC CATCCATCTC
CTGTCCGACC TCTGGTCCAA TACTTTCCAC GAAAGAGTTC CGCGCCAACC GACCGGGGGC
GAAGCCGCTG ACTGGCCACG CCTCCGGCAA CTCTTCATCG CTCTGCTGCA GCGGCGACCC
AAAGCCGAAA TCGACCTGTG GCCGTCTCAG CTCGAAGCGG CGGAGCGCGC CGTCGATCAG
GGCGACGACT TAGTGGTTTC CCTTCCGACG AGCGCAGGGA AGACACGGAT CGCCGAGCTC
TGCATTTTGC GGTGCCTGGC TGGCGGAAAA CGTGTGGTTT TCGTGACGCC GCTTCGGGCA
CTTTCCGCTC AAACAGAAAC GACACTGCAG AGAACTTTCG GTCCGTTGGG AAAGACGATT
TCAGCCCTGT ACGGTAGTAT TGGTGTCAGC GGCTTCGACG AAGACGCTAT TCGGGAAAGA
GACATCGTTG TCTCGACCCC GGAAAAACTA GATTTCGCGC TCCGCAACGA TCCTTCATTG
CTCGACGATG TCGGACTTCT GGTCTTTGAC GAGGGCCACA TGATCGGCCC CAACGAGCGG
GAGATACGGT ATGAGGTTCA AATCCAGCGC CTCCTTCGGC GCCGAGACGC GCATGCACGC
CGCATCGTTT GCCTTTCAGC GATACTTCCA GATGGCGACC AGCTCGACGA CTTCGCTGCT
TGGCTGCGGC GCGACCATCC GGGCGGCTTG ATCAAGAATG ACTGGCGGCC GACCCGACTG
CGCTTCGGGG AAGTCATCTG GACCCCAGCT TCGGCATCGG CAAGGTTGAA CCTGCGCGTC
GGCGACGAGC GGCCTTGGGT GCAGCGCTTC TTGACCGGGG CCGCGCCGCC GCTTTTCATC
CCGCCCAAGC GCTTGCGTAC TAAAGTCTTT CCGGGAAATC AACGTGAACT CTGTCTCGCA
ACAGCATGGC GGCTCGTCGA AGACGGGCAG ACCGTCCTGA TCTTCTGCCC CGAGCGGAGG
GGCGTGGAGC CGTTCGCGGA CGTCGTCGTC GACCTGCATG AGCGCGGCGC TCTCCGCTCG
TTGCTGGAGG TCGATCCAGG AGTGCTCAGC ACGGCGATCA CGCTCGGCGA GGAGTGGCTA
GGCCACGATA GCGCAATCTT GAAGTGCCTG CGCCTCGGCG TGGCGCTACA TCATGGAGCG
TTGCCGACCG CATATCGCAA AGAGGTCGAG CAGTTGCTGC GCGCGAACGT GCTCAAGGTC
ACCGTCTCGT CGCCTACGCT GGCGCAAGGC CTTAACCTTT CGGCCACGGC TGTGGTGATG
TTCTCCCTCC ATCGCGCCGG AGAGCTAATT GAGATCTCCG AATTCAAGAA CGTCATCGGC
CGAGCTGGCC GTGCTTATGT CGATGTGGAA GGGATCGTGC TCTTTCCGAT GTTCGACGAG
ATAGTGAAGA AGCGACGAAG CTGGGAAGCC CTCATCACTG ATCTTGGCGC GCGTGAAATG
GAGAGCGGAC TTGTACGCCT CGTCAGCGCC CTCTTGTTGC GAATGCGCGC TCGGGTTGGC
GGGGACCTGA ATCAACTCAT CGAATATGTG GTCAACAGCG CTGCAGCATG GGTCTTTCCG
GAGGTACAGA ATGAGACGCC CAAGGACCGT GAGCGTGCGC TCGCGGACTG GAATCGGCAC
GTCGCGACGC TCGACACAGC CATCTTGAGC CTTATCGGCG AGAACGAAAT CGCTGACCAT
GAAGTTGAGG CTGCGCTGGA CCACATACTG CAGTCCTCCC TCTGGCACCG CCGCCTTCTT
CGCCAGAACG ATCAGGTGCG GCACCTATTG AAGGCTGGCC TTCTCTCGCG TAGTCGACTC
ATCTGGAGTC AATCGACATC CACGCGTCGC CGGGGGTATT TCTTGGCCGG CGTCGGACTG
ACTACCGGCC AAGCGCTCGA TGCGATCGCG GCGGATGCCA ACTTACTGCT GTTGCAGGCT
AACGCCGGCA TCGGCGCCGG CGACGCCGGC GCGGCGATCG ATGCGGTCAC TCGCCTCGCC
GAACTGGTCT TCACGTTCTA TCCGTTCACT CCCGATCCCT GGCCCGGCAA CTGGCGCGAC
ATACTCCGTT CCTGGTTGCT AGGCCAACCC CTTGGTGCGC TCGCCGCAGG CCAAGCTTCG
GACACCCTCC AGTTCATCGA GGGAAGCCTC GTTTACCGTC TTCCATGGGC CATGGAAGCG
GTGCGGGTCC GCGCGGCGGC GAACGGGGAT ACGGTCGGTT TGTTCGGTCT TACCCTCGAA
GACCATGAGC TGAGCCTAGC TGTCCTCTCC GTGGAAACTG GCACGATGAA TCGTTCGGCA
TCGATTCTCA TCCAAGCAGG ATTCACGTCG AGGCTGGCCG CGATCAAAGC GGTGACCGAT
AGCGGCGCCA CATTTCAGAA CGGGGGACAG CTCCGAGCTT GGCTCAGCTC AGAGGCCTTG
GCGGCATGGA ACGCGCTGCC CGACTGGCCG ACGGCTGAGA CCAAAGCGAT GTGGACCGAG
TTCACTCAGG GATTCACTCC ACGCGCGAGC AACATTTGGA GCGACCGCCG ATACTGGGCA
AGTGCCACTT GGTACGGCGT TCCGCCACTT CCGGGCGTGC CCGTGCAGCT TCACGATTGG
AATGGTCAGC GGCTGGTGCT TTCAGCAGAT TGTACGCCCT TGGGGACATT GCGGAATGCA
CTGAACGCGA ACAGGAAAGG GCTCATTCAG GCAACGGTGT CACCGACCGC CGGAAGGATC
GATCTGGTGT ACATCGGGCC AGATGACCTC TCTGCGACCT AG
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| Protein sequence | MPTTPETIAA DIEEAATAGF RGNLLARGQA RAIIWRDGAL PAEAPAFAPQ LSYDLHSYAY
ALLGLALRLR EIGGDAARAR IAFEQAATAL EAVISKGDRQ EVDRDFHFVM AAASYHLAHL
SARAYSLLAT VDADENFSRI ERALAQLMRR NFEALRAGVL DYRASATGSD ARIAAEFQAR
LDQPEGAGDP EARGEFIFEG LDVALTDAFL SAISMFVLAL DRGDRSLVDQ ALARLRENLS
ICSELNLLPQ WWAHRLAIHL LSDLWSNTFH ERVPRQPTGG EAADWPRLRQ LFIALLQRRP
KAEIDLWPSQ LEAAERAVDQ GDDLVVSLPT SAGKTRIAEL CILRCLAGGK RVVFVTPLRA
LSAQTETTLQ RTFGPLGKTI SALYGSIGVS GFDEDAIRER DIVVSTPEKL DFALRNDPSL
LDDVGLLVFD EGHMIGPNER EIRYEVQIQR LLRRRDAHAR RIVCLSAILP DGDQLDDFAA
WLRRDHPGGL IKNDWRPTRL RFGEVIWTPA SASARLNLRV GDERPWVQRF LTGAAPPLFI
PPKRLRTKVF PGNQRELCLA TAWRLVEDGQ TVLIFCPERR GVEPFADVVV DLHERGALRS
LLEVDPGVLS TAITLGEEWL GHDSAILKCL RLGVALHHGA LPTAYRKEVE QLLRANVLKV
TVSSPTLAQG LNLSATAVVM FSLHRAGELI EISEFKNVIG RAGRAYVDVE GIVLFPMFDE
IVKKRRSWEA LITDLGAREM ESGLVRLVSA LLLRMRARVG GDLNQLIEYV VNSAAAWVFP
EVQNETPKDR ERALADWNRH VATLDTAILS LIGENEIADH EVEAALDHIL QSSLWHRRLL
RQNDQVRHLL KAGLLSRSRL IWSQSTSTRR RGYFLAGVGL TTGQALDAIA ADANLLLLQA
NAGIGAGDAG AAIDAVTRLA ELVFTFYPFT PDPWPGNWRD ILRSWLLGQP LGALAAGQAS
DTLQFIEGSL VYRLPWAMEA VRVRAAANGD TVGLFGLTLE DHELSLAVLS VETGTMNRSA
SILIQAGFTS RLAAIKAVTD SGATFQNGGQ LRAWLSSEAL AAWNALPDWP TAETKAMWTE
FTQGFTPRAS NIWSDRRYWA SATWYGVPPL PGVPVQLHDW NGQRLVLSAD CTPLGTLRNA
LNANRKGLIQ ATVSPTAGRI DLVYIGPDDL SAT
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