Gene RPD_3628 details

Gene Information

• Locus tag: RPD_3628
• ID: 4024142
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB5
• Kingdom: Bacteria
• Replicon accession: NC_007958
• Strand: +
• Start bp: 4044015
• End bp: 4047470
• Gene Length: 3456 bp
• Protein Length: 1151 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637963832
• Product: hypothetical protein
• Protein accession: YP_570752
• Protein GI: 91978093
• COG category: [S] Function unknown
• COG ID: [COG4717] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0684828
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.861297
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAGAATCG AAGAACTCGC GCTGGAGCGC TACGGCATCT TCACCGACCG CAAAGTCTCT 
TTCGATCCGC AGGCGTCGCT GCATGTGGTG TTCGGCGCCA ATGAAGCGGG CAAGACGTCG 
GCGCTGTCGG CGATCGCCGA TCTGCTGTTC GGCTTCGGCG CGCGGACCGA CTACGATTTC 
AGGCACGATA GCAAACTGCT GCGACTGGGC GGCACCTTCC GTCACTCCGA CGGCCGCGTG 
ATTAAGGCGC GGCGGCGCAA GGGCAACAAG AACACGCTGC TGGACGCCGA CGATCAGCCG 
TTGCCCGACG ATCATTTCGC CGCACTTCTC GGAGGCGTTT CGCGCACCGC CTTCAACAGC 
GAGTTCGGAA TGACGGCGCA GACGCTGCGG GAAGGCGGCG AAGAGCTGCT CAGCGCAGGC 
GGCCGTCTCG CCGAAACACT GGCGGCGAGT TCAGCCGGCA TGGCCGAATT ATCGCGCACC 
AAGGACCGCT TGCAGGAGCA GGCCGACCAG TTGTTCAGCG CGCGCAAATC CGCCAGCAAG 
CCGTTCTATC TGGCGGCCGA ACGCCGGGAG GCTTCCGACA AAGACCTTCG CGAGGCCATC 
GTCACACGCG AGGCACTGCG ACAAACGCAG GCCTCGGTGC AGGACGCGGC CTCCGAGCTG 
GAGAAGCTCA AGGTCGCTCA TGCGGCCTGC GGCAGCACGT TGGCGCGCTG GCAACGAATG 
TTGAGGGTGC GATCGCAGCT GACGCGGCTG GACCGCATCG AGGCTGAACT GACGGGGCTT 
GCCAACTTGC CGGTCGTCGC CGAGCAGACG CTCGCGGATT GGCGCGCCGC GATCGATCGG 
CGGGCCGCGC TTGAAGCCGA GATCGCCGCG CTTGACGAGG CGGCGGCGAC GGATGCCGCC 
GAGATCGCCA CTCTGGACGT CGATGACGCG CTGCTGGCGG AGGACGCCGC GATCGAAGTG 
CTGCGCGAAC GGCTGGGCGC GGTGCGCAAG GCGGCAGCCG ACCTGCCGCG ACGCCGTCAA 
GACCGCGCCA GCGCCGAGGC GGCGCTTGAT GATTGCGCGC GGCGACTCGG GCTGGTCTCG 
CATGTCGAGC TTCTGGCGAA GCTGCCGACG GACCCGGCGC TCGCAGATGC GCGCGATCGC 
ATCGAAATGA TGCGGCGCGC GACACAGGAA TTGGCCGAAA TCGAAGCCCG GCACGGTCGC 
GCCCGACGAG ACCTCGAGGC ATTCGCCGCG CGGGAGGGCG AAGAGCAGCA CGTCAGCGAC 
ATCGAGCCGC TGCGCCACCG CTTCGAGGCG CTTGGCGACA TTCCTGCGCA GGACGAGCGC 
CTGTACCGCG ATCGCGCCGT TTATGTACGC GAGATCGAAT CCATCCGCGA TGCCGTCGCG 
GCGCTCGACC CAGCGCCGGG ACCGCTCGAC CGGGTGCGCG CCTTGCCCGT GCCGGACCGC 
GCCACGATCA CCAAACACGC CGCCGCCGTC GAGCTCAGCG AGGCGGAGCT GAAGCGGCTC 
GATGCGGAGA TTTCGAAACT CGACGATGCG ATCGCCGCGA CCGAGGCCGA GCTGGCGCGG 
CTGTCGAGCT CTGGTGCGGT GCCGGCCCGG GCCGATCTGA TCGCGGCCCG ACACGCGCGC 
GACGCGAGGC TCGACGCGCT CCGCGCCGGC CTCGACGGCG ATCGTGACAA TCGCCTCGCC 
CGCTTCGACG AGGTCACCGA TACGTCGCGC AAGATCGACG GCATCACCGA CTCTCTGCTG 
ACCGACACCG AGCGCGCGAC CCGCCACGAA GACGCACAGC GGCGGATCGT CGACGCGCGC 
AACGAACGCG CGCGCGCGGA GACCAAGCGC GCCAGCCTGA CGACGGGGCT GGCAGAGATC 
GCCGATCGCT GGGCCAAGGC CTGGGCCGCT TCGGGCCTGC AGCCTCGGGG CCCGGCCGAG 
ATGCTGCGCT GGCGCGAACG GCTCGACGAT GTCGTCGCGC GGCTCGACAA ATGCGATCTG 
CAGCGCGCCG GCATCGACGC GTTGGCCACT GCCCTCGAAG ACGGCAAGTC GGCGATCATA 
GCGTTTCTCG ACAGCGTCGG ACGCCGGTCC GTTCCCACCG CGCCGGCCGC GGTGCTGTAT 
CGCGAAGCCA AGGGTCGGTT CGACCAATTG CAGGCGGCGT GGAGCGAGAC CAAGGCCCGT 
GCGGTGGAGA AAGCCCGCCT CGAACGCGAC CTGACCGAGG CCGATGCAGC CCGTGCGCAG 
ATCGAGACCC GCCTTGCAGA TCTTCGGCAG CATTGGCCGC GGACGATGAG CGCGATCGGG 
CTCGCCACCG ATGCGACGCC GGTGCAGGCC GAAGCGGCGC TGTCGATCTG GAACGCGGTG 
GCCGTGCCGC GCGCCAGCTT CGAGCGCGAG GGGCGCAGCG TCGATACCAT CATGTCCGAT 
CTGCAGGATT TCGAGACGGA GGTGACAGCC CTACTCGATC GGGTCGCGCC GGACCTGCGC 
GGCGTTTCCG CCCAGGAGGC AATGCCGCGC CTCGCGGAAC GTTTGGCCGA CGCCCGCCGC 
GGCAGCGAAG CGCGCAGGCG GTTGCAAGGA AATGCGGCGA AGCGTGCGGC CAATCGAAAT 
ACATTGGTCG CGCAACTGGC TGCAAGCACC AGCTTGCTGG AAGGCGCCAG CCGGTCGCTG 
CGCGCCGATA TCCCCGCACT GCCGGAGCTG CTGTCGCGTC TCGCCACGCG GCTGGCATTG 
CAAGCCGAGC AGTTGGCGTT GCGGAGCCAT CTGCTCGAGA TCGCCGACGG GCACGACGAA 
AGCGCGCTGC GCCAGGAGCG CGACGGCGTC GACCTCGACC GCTTGCCGGC CGACATCGCC 
AGCGCGACGG TGCAACAAGA CCAACTGCTG AAGGACATCT CGGACGCGGC GGCCAACCAC 
AACCAGCGGC AGCGCGAATT GGACGAGCTG ACAAAGGGCC GCGATGCCGC GGGCGCCGCC 
GGTCGGCGCC GCGAGGCGGC TGCCGAGATG CTGTCGATCG CGGAAGACTG GCTGCTGCGC 
TCGGCGGCTT CCCTGCTGGC CCGCCGTGCC ATCGAGCTTC ATCGCGCCAA GGTGCAGGAT 
CCGATGGTCG CGCGCGCCGG CGACTTGTTA GCGCTCGCGA CCGCAGGCGC GTTCGCGGGG 
CTCGGCATCG ACTATGGCGA CGATGACCAG CCGACGCTGG TGGCCCGGCG CGCGTCGGGC 
GAACGGGTGC CGCTCTCGGG ACTGAGCGAG GGAACGCGCG ATCAGTTGTT CCTGGCGCTG 
CGCCTCGCCT TGCTCGAGCG CCGAACCTCA GAGCCGATGC CGTTCATCGG CGACGACCTG 
CTGGCGAGCT TCGACGACAG ACGCACGCTG GCAACGCTGC GATTGCTGGC CGCAGCCGGA 
GCGCAGCGCC AGATGCTGCT CTTCACGCAC CACCAGCACG TGGCCGATCT CGCATTGTCA 
CTCGCGGATC ATCGCATCGA TCTCATCAAT CTGTAG 

 

Protein sequence

MRIEELALER YGIFTDRKVS FDPQASLHVV FGANEAGKTS ALSAIADLLF GFGARTDYDF 
RHDSKLLRLG GTFRHSDGRV IKARRRKGNK NTLLDADDQP LPDDHFAALL GGVSRTAFNS 
EFGMTAQTLR EGGEELLSAG GRLAETLAAS SAGMAELSRT KDRLQEQADQ LFSARKSASK 
PFYLAAERRE ASDKDLREAI VTREALRQTQ ASVQDAASEL EKLKVAHAAC GSTLARWQRM 
LRVRSQLTRL DRIEAELTGL ANLPVVAEQT LADWRAAIDR RAALEAEIAA LDEAAATDAA 
EIATLDVDDA LLAEDAAIEV LRERLGAVRK AAADLPRRRQ DRASAEAALD DCARRLGLVS 
HVELLAKLPT DPALADARDR IEMMRRATQE LAEIEARHGR ARRDLEAFAA REGEEQHVSD 
IEPLRHRFEA LGDIPAQDER LYRDRAVYVR EIESIRDAVA ALDPAPGPLD RVRALPVPDR 
ATITKHAAAV ELSEAELKRL DAEISKLDDA IAATEAELAR LSSSGAVPAR ADLIAARHAR 
DARLDALRAG LDGDRDNRLA RFDEVTDTSR KIDGITDSLL TDTERATRHE DAQRRIVDAR 
NERARAETKR ASLTTGLAEI ADRWAKAWAA SGLQPRGPAE MLRWRERLDD VVARLDKCDL 
QRAGIDALAT ALEDGKSAII AFLDSVGRRS VPTAPAAVLY REAKGRFDQL QAAWSETKAR 
AVEKARLERD LTEADAARAQ IETRLADLRQ HWPRTMSAIG LATDATPVQA EAALSIWNAV 
AVPRASFERE GRSVDTIMSD LQDFETEVTA LLDRVAPDLR GVSAQEAMPR LAERLADARR 
GSEARRRLQG NAAKRAANRN TLVAQLAAST SLLEGASRSL RADIPALPEL LSRLATRLAL 
QAEQLALRSH LLEIADGHDE SALRQERDGV DLDRLPADIA SATVQQDQLL KDISDAAANH 
NQRQRELDEL TKGRDAAGAA GRRREAAAEM LSIAEDWLLR SAASLLARRA IELHRAKVQD 
PMVARAGDLL ALATAGAFAG LGIDYGDDDQ PTLVARRASG ERVPLSGLSE GTRDQLFLAL 
RLALLERRTS EPMPFIGDDL LASFDDRRTL ATLRLLAAAG AQRQMLLFTH HQHVADLALS 
LADHRIDLIN L