Gene RPD_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3627 
Symbol 
ID4024141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4042795 
End bp4044018 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content64% 
IMG OID637963831 
Productmetallophosphoesterase 
Protein accessionYP_570751 
Protein GI91978092 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0630322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTCA CTTTCATTCA TGCCGCCGAT CTTCATATCG ACAGCCCGCT CGCGGGGCTT 
CGCGCAAAGA ACGAAAACAT CGCGCGCAGT TTCGCCGACG CCGGGCGAAA GGCCGTGCAG
GCGCTAATCG ACGAGACGAT CGCCAGCAAG GCGGCGTTCC TGATCATTGC CGGCGACATC
TTCGACGGCG ACTGGAAAGA TGTCACCACG GGATTGTTCT TCATCGGCGC CATCAGCGCG
CTGCATCGCG CAGGGATTCC GGTCTTCATC GTCAAGGGCA ATCACGACGC CGAAAATCTG
ATGTCGCGGG ATTTGCCCTA TCCGGGCAGC GTGACCGTGT TTCCGACGCG AGCGTCGACG
GTCGTGCTCG AAGAGCATCG CGTGGCGCTG CATGGCCGCA GCTTTCCCGA TCGCCTGACC
GCGGACTTCG TCGCGACCTA CCCCACACGC CGCGAGGGCT GGCTCAACAT CGGCGTCTTG
CACACGTCGC TCGACGGAAG TCGCGGCCAC GAGGGATATG CGCCGTGCAG TTTGGACGAC
CTCAAGCGGT TTGGTTATGA TTACTGGGCG CTTGGACATG TTCACGCCGC GGAAATCGTC
AGCCGTGACC CATGGATCGT GTTCCCCGGC AATCTGCAGG GACGCAGCGT CCGCGAAACC
GGACCGAAGG GCGCTATGCG GGTCACCGTC GAGGATGGCC GCGTCGTCGA CGTCTCGCCG
CTGACGCTCG ACAGCGCACG CTGGGCGCAC CTGACAATCG ATCTCGCCGG CTGCGCCGAC
GAAGCGCAGA TCCTGCCCCG CATCACATCG GAGCTCTCCG ACGTCCATGC GCAAAGCAAG
GGGCGCGCGC TTGCCGTCCG GGTGACGCTG ACTGGAACGA CGACGCTGCA TAGTCACCTG
ATAGCCCGTC GCGAAGTGTT GCAGGACGAA CTACGCGCCA GCGCGCTGCA TCTCGCCGAC
GATTGTTGGG TCGAACAACT CAAGATCAGA ACGACGCTTC CAGCGCAGCC GGTCGTCGCA
GGCCCCGACA CCGCGAACAT CGATGTCGCT GCCCTGCTCG GCGAAGCCGC GCAGGATCCG
AGTTTTGCGG CCGCATTGGC CGAGCTGACC GAGACCATCA GGGCGAAGCT GCCGCGAGAC
TTGCAGGACG AGTTATCAGC ATCGGACACC GTCGCGTCCC TGACCGAGGA CGCCCGCGCG
TTGCTGGTCG GAGAGCTGTC GTGA
 
Protein sequence
MRFTFIHAAD LHIDSPLAGL RAKNENIARS FADAGRKAVQ ALIDETIASK AAFLIIAGDI 
FDGDWKDVTT GLFFIGAISA LHRAGIPVFI VKGNHDAENL MSRDLPYPGS VTVFPTRAST
VVLEEHRVAL HGRSFPDRLT ADFVATYPTR REGWLNIGVL HTSLDGSRGH EGYAPCSLDD
LKRFGYDYWA LGHVHAAEIV SRDPWIVFPG NLQGRSVRET GPKGAMRVTV EDGRVVDVSP
LTLDSARWAH LTIDLAGCAD EAQILPRITS ELSDVHAQSK GRALAVRVTL TGTTTLHSHL
IARREVLQDE LRASALHLAD DCWVEQLKIR TTLPAQPVVA GPDTANIDVA ALLGEAAQDP
SFAAALAELT ETIRAKLPRD LQDELSASDT VASLTEDARA LLVGELS