| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3622 |
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| Symbol | |
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| ID | 4024136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4037649 |
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| End bp | 4038884 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963826 |
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| Product | major facilitator transporter |
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| Protein accession | YP_570746 |
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| Protein GI | 91978087 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.769068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.781308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAG CTCAGCTCAG CCCGTTTCAG CGCTGGTCGA TCCTGATCGG CGCCTCGGTG
CTGCTCAGCC TCGCGATGGG GATGCGGCAG AGCTTCGGAC TGTTTCAACC TTCCGTGATC
CGCGACGTCG GCATCACCAG CGCCGATTTC TCGCTGGCGA CGGCTCTGCA GAATATCATC
TGGGGCGTGA CGCAGCCGAT GGTCGGGCTG ATCGCCGACC GCTACGGCTC GCGCTGGGTG
ATGCTCGGCG GCGTGCTGAT CTATGCCGCC GGCCTGGTGC TGATGATGAT CGCCGAATCG
GCGTTGGTAT TTACGCTCGG CTGCGGCGTC TGCGTCGGCA TCGCGTTGTC CTGCACCGCC
TCCAGCATGA CGATGACGGC GACCTCGCGC ACCGTGTCGG CCGCCAAGCG CAGCGTGGCG
ATGGGCGCGG TCTCGGCCGC GGGATCGCTC GGCCTGGTGC TGGCCTCGCC GCTTGCGCAA
ACCTTGATCA CAACCTCGGG CTGGCAGATG GCGCTGATCG GCTTCCTCGG CCTTGCCGCG
GTGATGCTGC CATCCGCCTT TTTCGCGGGG CGGTCCGACG ACATCGAGAT CGACAAGGCC
GACGATCTGG ATCAGTCGGC GGGTCAGGTG GTGCAGACCG CGCTCGGCCA TTCCGGTTTC
ATGGTGATGG CGATCGCGTT CTTCGTGTGC GGGCTGCAGC TCGTCTTCAT CACCACGCAT
CTGCCGAACT ATCTCGCGAT CTGCGGTCTT GACCCCTCGC TCGGCGCCAC CGCGCTGGCG
GTGATCGGGC TGTTCAACGT GATCGGCTCC TACGCCTGCG GCTGGCTCGG CGGTCGCTAT
CCGAAGCAAT ACCTGCTCGG CGGCATCTAT ATCGTGCGCT CGCTGACGAT CGCGGCGTAT
TTCTACTTCC CGGCCTCGGC GACCACGACA CTGGTGTTCG CCGCGGTGAT GGGCGCGCTA
TGGCTCGGCG TGATCCCGCT GGTCAACGGC CTGGTCGCGC AACTGTTCGG GCTGCGCTAC
ATGGCGACGC TGACCGGCAT CGCTTTCTTC AGCCATCAGG TCGGTTCGTT CCTGGGGGCG
TGGGGCGGCG GTATGGTCTA CGATCACCTC GGCAATTACG ATCGCGCCTG GCAGGCCGCG
GTGTTGATCG GGCTGATCGC CGGCACCGCG CAGATGATGA TGAATGTCCG TCCGCCGCGG
CGGCGTGAGG AATTGGCGGT GCCTGCCACC GCCTGA
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| Protein sequence | MKAAQLSPFQ RWSILIGASV LLSLAMGMRQ SFGLFQPSVI RDVGITSADF SLATALQNII
WGVTQPMVGL IADRYGSRWV MLGGVLIYAA GLVLMMIAES ALVFTLGCGV CVGIALSCTA
SSMTMTATSR TVSAAKRSVA MGAVSAAGSL GLVLASPLAQ TLITTSGWQM ALIGFLGLAA
VMLPSAFFAG RSDDIEIDKA DDLDQSAGQV VQTALGHSGF MVMAIAFFVC GLQLVFITTH
LPNYLAICGL DPSLGATALA VIGLFNVIGS YACGWLGGRY PKQYLLGGIY IVRSLTIAAY
FYFPASATTT LVFAAVMGAL WLGVIPLVNG LVAQLFGLRY MATLTGIAFF SHQVGSFLGA
WGGGMVYDHL GNYDRAWQAA VLIGLIAGTA QMMMNVRPPR RREELAVPAT A
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