| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3612 |
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| Symbol | |
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| ID | 4024126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4024975 |
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| End bp | 4026519 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963816 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_570736 |
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| Protein GI | 91978077 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATC CGTCGATCCA CGCCCGCACC CAGCCCGACA AGATCGCCTA TCAGATGGCC
GGCACCGGCA AGGCGATCAC CTATCGCGAG CTGGACGAGC TGTCGAACCA GGGTGCGCAG
ATGTTCCGCG CGCTCGGGCT CAAGGCCGGC GACCACGTCG CGCTGCTGAT GGAAAATCGG
CTGGCGTTCA TGGAGATCTG CTGGGCGGCG CAGCGCGCCG GGCTCTACTA CACCGCGATC
AGCCGCTATC TGAAGAAGGA CGAGATCGCC TATATCGTGC AGGATTGCGG CGCCAAAGTC
GTGATCACCT CGCCGCAAGG CGCTGATTCG ATCGCGCCGT TGCTCGGCAC CCTGCCCGGC
GTCGAATTCT TCATGATCGA CGAGCCGGCT CCGGGCTTCC GCTCCTGGGA CAAGGAGGCC
GGCGCGCAGC CGGTGACGCC GATCGCCGAC GAGGTCGCCG GCTACGACAT GCTGTACTCG
TCGGGCACGA CCGGACGCCC CAAGGGCATC AAGCGCGAGT TCGAAGGCAA CGCCATCGAC
GTTCCGAGCC CGTTCCTCAG GCTGCTGTGC GAGCGGATGT GCGGTATGAA TCAGGACAGC
ATCTATCTGT CGCCGGCGCC GCTGTATCAC GCCGCTCCCT TGCGCTTCAA CATGATGGCC
ACCACGCTCG GCGGCACCTC GGTGATCATG GAGAATTTCG ACGCCGAGCA GTTTCTGGCG
CTGGTCGAGA AGTACAAGGT GACGCAGTCG CAGCTGGTGC CGACGATGTT CGTGCGGATG
CTGAAGCTGC CCGACGACAT CCGCGCGCGC TACGACGTGT CGACGCTGAA GGGCGCGATC
CATGCCGCCG CGCCCTGCCC GGTCGACGTC AAGGCGAAGA TGATCGAATG GTGGGGCCCG
ATCCTGATCG AGTACTACGC CGGCTCCGAA GGCAACGGCG TCACGGTGTC GACCTCGCAG
CAATGGCTGA CGCATCGCGG CACGGTCGGC AAGGCGGTGG TCGGCATCAT CAAGATTCTC
GACGACGCCG GCGAGGAGAT GCCGACCGGC GAGATCGGCA CGGTGTATTT CGCCGACGCG
CCGGCGTTCA GCTATCACAA CGATCCGGAC AAGACCAAGC GCGCCTATAA CGCGAAGGGC
TGGTCGACGC TCGGCGACGT CGGCTATCTC GACGCCGAGG GCTTCCTCTA TCTCACCGAC
CGCAAGAGCT ACATGATCAT CTCCGGCGGC GTGAACATCT ATCCGCAGGA AACCGAGGAC
GTGCTGCTGA CGCATCCCGA CGTCGCCGAC GTCGCGGTGT TCGGCGTGCC GAACGAGGAG
ATGGGCGAAG AGGTCAAGGC CGTGGTGCAG ACGCGCGACG GCGTCAAGCC GGGCAAGGAG
CTGGAGGCGA AGCTGATCGG CTTCTGCCGC GAGCATCTGT CGGCGATCAA GTGCCCGCGC
TCGATCGATT TCGAAGCCGA ACTGCCGCGC ACGCCCACCG GCAAGCTGGT CAAGCGCCAC
CTCAAGGATC GCTACTGGCC GAAGAAGGAA GCGACGACCG CGTGA
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| Protein sequence | MTHPSIHART QPDKIAYQMA GTGKAITYRE LDELSNQGAQ MFRALGLKAG DHVALLMENR
LAFMEICWAA QRAGLYYTAI SRYLKKDEIA YIVQDCGAKV VITSPQGADS IAPLLGTLPG
VEFFMIDEPA PGFRSWDKEA GAQPVTPIAD EVAGYDMLYS SGTTGRPKGI KREFEGNAID
VPSPFLRLLC ERMCGMNQDS IYLSPAPLYH AAPLRFNMMA TTLGGTSVIM ENFDAEQFLA
LVEKYKVTQS QLVPTMFVRM LKLPDDIRAR YDVSTLKGAI HAAAPCPVDV KAKMIEWWGP
ILIEYYAGSE GNGVTVSTSQ QWLTHRGTVG KAVVGIIKIL DDAGEEMPTG EIGTVYFADA
PAFSYHNDPD KTKRAYNAKG WSTLGDVGYL DAEGFLYLTD RKSYMIISGG VNIYPQETED
VLLTHPDVAD VAVFGVPNEE MGEEVKAVVQ TRDGVKPGKE LEAKLIGFCR EHLSAIKCPR
SIDFEAELPR TPTGKLVKRH LKDRYWPKKE ATTA
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