Gene RPD_3611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3611 
Symbol 
ID4024125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4023640 
End bp4024815 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content67% 
IMG OID637963815 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_570735 
Protein GI91978076 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG CCTATATCGT CGCCGCCGCA CGCACCGCCG GTGGCCGCAA GGGAGGCCGC 
ATCGCCGGCT GGCATCCGGC CGATCTCGCA GCTTCCGTGC TGAATGCGCT GGTCGAGCGC
TCCGGCGCGG CGCCGGACCA GATCGAGGAC GTCATCATGG GTTGCGTCGG CCAGGCCGGC
GAACAGGCGG TCAACATCGC CCGCAACGCG GTGCTGGCGT CGAAGCTGCC GGAAAGCGTG
CCCGCCACCT CGATCGACCG GCAGTGCGGC TCGTCGCAGC AGGCGCTGCA TTTTGCCGCA
CAGGCGGTGA TGTCGGGCTC GATGGACATC GTGATCGCCG CCGGCGTCGA GAGCATGACG
CGGGTGCCGA TGGGCACGCC GAGCATTCTC GCAGCCAAGG CCGGGCTCGG CAGCTACAAG
AGCCCGAACA TGGAGCAGCG CTACCCGAAC ATCCAGTTCA ACCAGTTCAC CGGCGCCGAG
ATGGTGGCGC ACAAATACGA TCTGTCGAAG GACCAGCTCG ACGAATACGC CTATCAGAGC
CACCAGCGCG CGATCGCGGC GACCCAGGCC GGCAAGTTCA AGGACGAGAT CGTGCCGCTC
ACGATCACCC GCGCCGACGG CTCGACCGAC ACCCACCATA TCGATGAAGG CATCCGCTTC
GACGTGACGC TCGACGGCAT CAAGGGCGTC AAGCTGATCA ACGAGAACGG CGGCCGGCTG
ACGGCGGCGA CCGCGAGCCA GATCTGCGAC GGCGCTTCCG GCGTCGTGGT GGTCAACGAG
AAGGGCCTGA AGCAGCTCGG CGTCAAGCCG CTGGCGCGGA TCCATCACAT GACGATGATG
GGCGGCGACC CGGTGATCAT GCTGGAAGCA CCGCTGCCGG CGACCGAACG CGCGCTGAAG
AAGGCCGGCA TGAAGATCGA CGACATCGAT CTGTTCGAGG TCAATGAGGC GTTCGCCTCG
ATCCCGACCG CGTGGCTGAA GTCGACCGGC GCCGATCCGG CCCGGCTCAA CGTCAATGGC
GGCGCGATCG CGCTCGGGCA TCCGCTCGGC GGCTCCGGCA CCAAGCTGAT GACCACGCTG
ATCCACGCTC TGCAGCAATC CGGCAAGCGC TACGGCCTGC AGACCATGTG CGAAGGCGGC
GGCATGGCCA ACGTCACCAT CGTCGAGCGG CTGTAA
 
Protein sequence
MAEAYIVAAA RTAGGRKGGR IAGWHPADLA ASVLNALVER SGAAPDQIED VIMGCVGQAG 
EQAVNIARNA VLASKLPESV PATSIDRQCG SSQQALHFAA QAVMSGSMDI VIAAGVESMT
RVPMGTPSIL AAKAGLGSYK SPNMEQRYPN IQFNQFTGAE MVAHKYDLSK DQLDEYAYQS
HQRAIAATQA GKFKDEIVPL TITRADGSTD THHIDEGIRF DVTLDGIKGV KLINENGGRL
TAATASQICD GASGVVVVNE KGLKQLGVKP LARIHHMTMM GGDPVIMLEA PLPATERALK
KAGMKIDDID LFEVNEAFAS IPTAWLKSTG ADPARLNVNG GAIALGHPLG GSGTKLMTTL
IHALQQSGKR YGLQTMCEGG GMANVTIVER L