Gene RPD_3608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3608 
Symbol 
ID4024122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4020582 
End bp4021388 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID637963812 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_570732 
Protein GI91978073 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.610166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGG TCCTGCTGGT CGACCATGCC GATGGCGTCG ATTGGGTCAC GCTCAATCGC 
CCCGACAGTC TGAACGCGCT CGACCCCGAA CTGATCGACG CGCTGAATGT CTATTTCGGC
CAGTTGCAGC GCAACCGCGA CACCCGTGTG GTGGTGCTGA AGGGCGCCGG CCGCGCGTTC
TGCGCCGGCC TCGATCTCAA ACAGGCGATG GCCCGCCGCG GCGAACGACA GGAGCCGCCG
GGCGTCACTG AATCGCTGGA TTCGCAGCGG CGGATCGCCG ACATCGTGAT GCTGATGCGG
CGCTGTCCGC AGCCGATCAT CGCGCTGGTC CACGGCGCCG CCGCCGGCGG CGGCTTCGCG
CTGGCGCTCG CCAGCGACAT TCGCATCGCC GGCCGCAGCG CGCGGATGAA CTGCGCCTTC
ATCAAGCTCG GGCTCGGCGG CTGCGACATC GGCGCCAGCT ACTTTTTGCC GCGCCTCGTC
GGCGTCTCGG TCGCCTCCGA ACTGATCCTC ACCGGCCGAT TCATCGAAGC CGAACGCGCG
CTGATGACCG GCCTCGTGTC GGAACTGGTC GAGGACGGTC AGCTCGAGGC CGCCGCGCAG
CCTTATGTCG ATGCGATGCT GGCGGCGTCG CCGGTCGGCC TGCGGCTGTC GAAGGAATGT
CTCAACATGG CGGTCGATGC CGGATCGATC GAATCCGTGA TCGCCATGGA AGATCGCAAT
CAAGTGCTGT GCTCGCGCTC GGAAGATTTC GACGAGGGCA TCAGCGCCTT TCTGGAAAAA
CGCAAGCCGG TCTATGTTCG GCGCTGA
 
Protein sequence
MTEVLLVDHA DGVDWVTLNR PDSLNALDPE LIDALNVYFG QLQRNRDTRV VVLKGAGRAF 
CAGLDLKQAM ARRGERQEPP GVTESLDSQR RIADIVMLMR RCPQPIIALV HGAAAGGGFA
LALASDIRIA GRSARMNCAF IKLGLGGCDI GASYFLPRLV GVSVASELIL TGRFIEAERA
LMTGLVSELV EDGQLEAAAQ PYVDAMLAAS PVGLRLSKEC LNMAVDAGSI ESVIAMEDRN
QVLCSRSEDF DEGISAFLEK RKPVYVRR