| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3594 |
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| Symbol | |
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| ID | 4024108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4006270 |
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| End bp | 4007895 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963798 |
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| Product | hypothetical protein |
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| Protein accession | YP_570718 |
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| Protein GI | 91978059 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.234761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.928094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA TGACCGGCGG CGAAGCGATC GTACAAGGCC TCGTCGCGCA CGGCGTCGAC
ACCGTGTTCG GCCTGCCCGG CGCGCAGATC TACGGCCTGT TCGACGGCTT CGCCAAGGCG
CAGTTGCGGG TGATCGGGGC GCGGCACGAG CAGGCCTGCG GCTATATGGC GTTCGGCTAT
GCGCGCGCCT CGGGCCGCCC CGGCGTGTTC AGCGTCGTGC CCGGCCCCGG CGTGCTCAAT
GCGGGCGCTG CGATGCTCAC CGCGTTCGGC TGCAACGAGC CGGTGCTGTG TCTCACCGGG
CAGGTGCCGA GCGCTTATCT CGGCCGCGGC CGCGGCCATC TGCACGAGAT GCCGGACCAG
CTCGCGACGC TGCGCAGCTT CATCAAATGG GCGGAGCGGA TCGAATATCC CGGCAGCGCG
CCGGCGCTGG TGGCGCGCGC GTTTCAGGAA ATGATGTCCG GCCGGCGCGG CCCGGTGGCG
CTGGAAATGC CCTGGGACGT GTTCACGCAA CGCGCCGAGA CCGCGGCCGC GATCAAGCTC
GATCCGGTCG CGCCGCCGCT GCCCGATCCC GACCGGATCG ACGCGGCGGC CAGGCTGATC
GCCGCGAGCA GGACGCCGAT GATCTTCGTC GGCTCCGGCG CGCTCGACGC CGGCGACGAG
ATTCTCGAAC TCGCCGAGGC GATCGACGCG CCGGTCGTGG CGTTCCGCTC CGGCCGCGGC
ATCGTCAGCA ACGCGCATGA GCTGGGCCTC ACCTTCGCCG CCGCCTATCA GCTCTGGCCG
CAGACCGATC TGATCATCGG CATCGGCACG CGGATGGAGT TGCCGACCAC GTTCCGCTGG
CCGTTCCGCC CGGCGGGGCA GACCTCGGTG CGGATCGACA TCGATCCCGC CGAGATGCGC
CGTTTCTCGC CGGACGCAGC CGTCGTCGCC GATGCGAAAG CCGGCGCGCG CGCGCTGGTC
GACGCGGTGA GCAAGCGCGG CTACAGCAAG ACCCAGGGCC GCCGCGACAC CATCCGCGAC
GCGACTGCGC GCACGCTCGA ACAGATCCAG TCGGTGCAGC CACAGATGGC GTATCTGAAG
ATCCTGCGTG AGGTGCTGCC GGACGACGCC ATCGTCACCG ACGAGCTCTC GCAGGTCGGC
TTCGCCTCCT GGTACGGCTT CCCGGTGTAT CAGCCGCGCA CCTTCCTCAC CTCGGGCTAT
CAGGGCACGC TCGGCTCCGG CTTCCCGACC GCGCTGGGCG CCAAGGTCGC CTTCCCTGAC
AGGCCCGTGG TGGCGATCAC CGGCGACGGC GGTTTCATGT TCGCGGTACA GGAGCTCGCC
ACCGCGGTGC AGTTCAACAT CGGCGTGGTC ACGCTGGTGT TCGACAATTC GGCCTACGGC
AACGTCCGGC GCGATCAGGT CACCCAGTTC GAGGGCCGCG TCGTGGCGTC CGATCTGGTC
AACCCGGATT TCGTCAAGCT CGCGGAATCG TTCGGCGTCG GCGCCGCGCG CGTCACCGCG
CCGGATCACT TTCGGCCCGC GCTGGAAAAA GCGCTGGCGC ATGGCGGTCC GTATTTGATC
GCGATCGACG TAGCGCGCGA CAGCGAGGCC AGCCCGTGGC CGTTCATCCA TCCGGCGAAA
CCGTAG
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| Protein sequence | MSIMTGGEAI VQGLVAHGVD TVFGLPGAQI YGLFDGFAKA QLRVIGARHE QACGYMAFGY
ARASGRPGVF SVVPGPGVLN AGAAMLTAFG CNEPVLCLTG QVPSAYLGRG RGHLHEMPDQ
LATLRSFIKW AERIEYPGSA PALVARAFQE MMSGRRGPVA LEMPWDVFTQ RAETAAAIKL
DPVAPPLPDP DRIDAAARLI AASRTPMIFV GSGALDAGDE ILELAEAIDA PVVAFRSGRG
IVSNAHELGL TFAAAYQLWP QTDLIIGIGT RMELPTTFRW PFRPAGQTSV RIDIDPAEMR
RFSPDAAVVA DAKAGARALV DAVSKRGYSK TQGRRDTIRD ATARTLEQIQ SVQPQMAYLK
ILREVLPDDA IVTDELSQVG FASWYGFPVY QPRTFLTSGY QGTLGSGFPT ALGAKVAFPD
RPVVAITGDG GFMFAVQELA TAVQFNIGVV TLVFDNSAYG NVRRDQVTQF EGRVVASDLV
NPDFVKLAES FGVGAARVTA PDHFRPALEK ALAHGGPYLI AIDVARDSEA SPWPFIHPAK
P
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