Gene RPD_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3578 
Symbol 
ID4024092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3983641 
End bp3984138 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID637963782 
Producthypothetical protein 
Protein accessionYP_570702 
Protein GI91978043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.436971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.836004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGC TTCGTTCATC CACTTCGCTT CATGGCTTGA AGGCGGCCGG AATCGCCGCG 
GCGATGCTGC TGTCGGCCTC GGCGAGTTAC GCCGATGGGC CGTTCGCCGG CTTCAATGGT
TCGTGGTCCG GCACCGGCAC CGTCGCCCTG TCCGATGGAA CGAAGGAGCG GATTCGCTGC
CGGGCGACCT ACAAGGTCGG CGGCGGCGGC AACGAACTCG CCCAGACGCT GCGCTGCGCC
AGCGACAGCT ACAAGTTCGA CCTGACCGCC AACGTCATCA GTAACGGCGA ACGGATCTCC
GGAAACTGGA GCGAAGCCAG CCGCAACATC AACGGCAACC TTCAGGGTAA GGCCGGCGGC
GGCAACATCG AAGTGTTCGT CGAGGCCGCG GGCTTCGCCG CCAGCATCTC GCTGGCCACG
CGCGGCAACA AGCAGTCGGT CGCGATCAGC TCCAAGGGCG ACATCCGCGG CGTCAACATC
AGCATGACGC GCGGCTGA
 
Protein sequence
MRLLRSSTSL HGLKAAGIAA AMLLSASASY ADGPFAGFNG SWSGTGTVAL SDGTKERIRC 
RATYKVGGGG NELAQTLRCA SDSYKFDLTA NVISNGERIS GNWSEASRNI NGNLQGKAGG
GNIEVFVEAA GFAASISLAT RGNKQSVAIS SKGDIRGVNI SMTRG