| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3545 |
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| Symbol | |
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| ID | 4024059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3939652 |
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| End bp | 3940362 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637963749 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_570669 |
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| Protein GI | 91978010 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.350632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGG ATCTTGCCAG GGGCGATATT TTCATTATCG ATCGCGATCG TCGCCTGCGT
GCTTTGCTAT CGACCGCACT CCTTCGGTCC GGTTATCGGG CGGTCTGTTT TGCGGACGAC
CACGCTCTGC TGAAGACAGC GCGTGCGCAG CGCCCCGCCT GCATATTAGT CGAAGAGATC
GCGGCCTGGT CGGTTCTGCA ACGGATGCAC ACGGCTGACT ATCTCGTTCC GATCATTTGC
ACGTCGGAAG CTGGAAGTAT TGAGGTCGCC GTCAGGGCGA TGAAAGGCGG AGCGGTGGAT
TTCATCGAGA AGCCCTTCAT CGTCGACGAT GTCGTTCGGC GGATTGGCGA GGCAGTCGCG
ACGGATTCCA AGCGGTGGCG GATCGCTGCC GGTGCGGTCG ACGTTTCGCT GCTGGAACGG
CCTCTCACCC GTCGCGAAAT CGATGTGCTG CGGGAGTTCG TGGCCGGCAA TTCAAACTGG
GAAGCCAGTG AGCATCTCGG TCTCAGCGTC CGAACGATCG AGTTTTTCCG GTCGCGATTG
ATCAAAAAGT TCCACGCGAA AAGTCTGCCG GATTTGGTTC GTATCATCTT GACTGGCAAC
GGCCTCAATC CGGGCTGTCG CGTCGGTTCA CGCCATGAGT GTTGCGAATG CGAGCGTCGC
CGATGCGGCG ATGCGGGTTC AGCCGATCGC ACGTCTCGCG CCGATTCCTG A
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| Protein sequence | MTADLARGDI FIIDRDRRLR ALLSTALLRS GYRAVCFADD HALLKTARAQ RPACILVEEI
AAWSVLQRMH TADYLVPIIC TSEAGSIEVA VRAMKGGAVD FIEKPFIVDD VVRRIGEAVA
TDSKRWRIAA GAVDVSLLER PLTRREIDVL REFVAGNSNW EASEHLGLSV RTIEFFRSRL
IKKFHAKSLP DLVRIILTGN GLNPGCRVGS RHECCECERR RCGDAGSADR TSRADS
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