| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3539 |
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| Symbol | |
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| ID | 4024053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3929938 |
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| End bp | 3930954 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963743 |
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| Product | luciferase-like |
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| Protein accession | YP_570663 |
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| Protein GI | 91978004 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACCGC TCTCCATCCT CGATCTTTCC GTCGTCACCA CCGGCACGCC GCCGGCGGCG
GCCTTGCGCA ACTCGATCGA CCTCGCCCGG CATGCCGACA AACTCGGCTA TGTCCGTTAT
TGGCTGGCCG AACACCATAA TCTGCCGTCG GTCGCGAGCC CGGCGCCGGA GATCATGATC
GGGCAGATCG CTGCGGTGAC CGAGCGCATC CGCGTCGGTT CCGGCGGCGT GATGTTGCCG
AACCACGCGC CGCTGATGGT CGCCGAGCGC TTCAAGATGC TGGAGGCGCT GTTCCCCGGC
CGCATCGATC TCGGCATCGG TCGCGCGCCG GGTACCGATC AGGCCACCGC CCATGCGCTG
CGGCGCCGGC TTGATGTCCG CGAGGGTGAT GATTTCCTCG AGCGGCTGCA GGAACTGACG
CTGTGGGAGA CTCGCGGCTT CCCGGCCGGC CATCCCTACA ACAACGTCGT GGCGATGCCG
GATGACGCGC CGCTGCCGCC GATCTGGCTG CTCGGCTCCA GCGACTACAG CTCGGAACTC
GCCGCTCAGG TCGGGATGGG CTTCGCGTTC GCGCACCACT TCGCGTCCTA CGACGCCGCC
GAAGCGCTGA CGCATTATCG CGCCAGTTTC CGGCCGACCC GCTGGCGTAG CACGCCGCAC
GGCATTCTCG CTGTGGCGGC GGTGATCGCC GACACCGACG AAGAGGCCGA GCGGCTCGCG
CTCTCGATGG ACGTCAGCCG GCTGCTGCGT GATCGCGGTC GCTACGTGCC GCTGCCGAGC
GTCGAGGAGG CGCAGGCCTA TCCGTTGACC GACGCCGACC GCGCCTCGAT CGCGCGCAAC
CGCTCGCGGC TGTTCGTCGG CAGCCCGTCG ACGGTGATGC AGGCGCTGCA GCCGCTGATC
CGCGCCAGCC AGGCCGATGA GTTGATGGTG ATCACCGCGA CCCACGATCA CGACGCCCGC
AAGCGCTCGT ATAGTTTGCT CGCGGATGCG TTCAAGCGGC AGAGGGTTGC GGCGTAG
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| Protein sequence | MLPLSILDLS VVTTGTPPAA ALRNSIDLAR HADKLGYVRY WLAEHHNLPS VASPAPEIMI
GQIAAVTERI RVGSGGVMLP NHAPLMVAER FKMLEALFPG RIDLGIGRAP GTDQATAHAL
RRRLDVREGD DFLERLQELT LWETRGFPAG HPYNNVVAMP DDAPLPPIWL LGSSDYSSEL
AAQVGMGFAF AHHFASYDAA EALTHYRASF RPTRWRSTPH GILAVAAVIA DTDEEAERLA
LSMDVSRLLR DRGRYVPLPS VEEAQAYPLT DADRASIARN RSRLFVGSPS TVMQALQPLI
RASQADELMV ITATHDHDAR KRSYSLLADA FKRQRVAA
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