| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3538 |
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| Symbol | |
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| ID | 4024052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3928871 |
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| End bp | 3929725 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963742 |
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| Product | prephenate dehydratase |
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| Protein accession | YP_570662 |
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| Protein GI | 91978003 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.683158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA CCATGAAAAT AGCATTTCAG GGCGAGCCCG GCGCCAACTC GCACATCGCG
ATCGGCGACG CCTACCCCAG CGCCGAAGCG CTGCCTTGCG CCACCTTCGA GGACGCGCTC
GCCGCGATCT CCTCGGGTGA GGCCGATCTC GGCATGATCC CGATCGAGAA CTCGGTCGCT
GGCCGCGTCG CCGACATTCA TCATCTGCTG CCGCAATCCG GCTTGTACAT CGTCGGCGAA
TGGTTTTTGC CGATCCGGCA TCAACTGGTC GCCGTGCCGG GCGCGAAGCT CGAGGAGATC
AGGACGGTCG AGAGCCACGT CCATGCACTC GGTCAGTGCC GTCGTATCAT CCGCAAGTTC
GGCCTCCGGC CGATCGTCGC CGGCGACACC GCCGGTTCGG CGCGGATCGT CGCCGAGCGT
GGCGACAAGA GTTGCGCGGC GATCTCGTCG CGGCTGGCGG CGAAGATCTA CGGCCTCGAC
ATTCTTGCCG AAGACATCGA GGACGAAACC CACAACACCA CCCGCTTCGT GATGCTGGCG
CGCGAGCCGC GCTGGGCGGC GCAGGGGTCG GGCGCGCTGG TCACCACTTT TGTATTCCGG
GTGCGCAACC TGCCGGCCGC TCTGTACAAG GCGATGGGCG GCTTCGCGAC CAACGGCGTC
AACATGACCA AGCTGGAAAG CTACATGGTC GACGGCAATT TCTTCGCCAC GCAGTTCTAC
GCCGATGTCG ACGGCCACCC CGAAGACCGC AACCTCGCTT TCGCGCTCGA CGAGCTGAAA
TTCTTCTCGC GCGAATTCCG CATCGTCGGC GTCTATCCGG GCCACCCGTT CCGGGCGACG
TTTACCGAGC GGTGA
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| Protein sequence | MTKTMKIAFQ GEPGANSHIA IGDAYPSAEA LPCATFEDAL AAISSGEADL GMIPIENSVA
GRVADIHHLL PQSGLYIVGE WFLPIRHQLV AVPGAKLEEI RTVESHVHAL GQCRRIIRKF
GLRPIVAGDT AGSARIVAER GDKSCAAISS RLAAKIYGLD ILAEDIEDET HNTTRFVMLA
REPRWAAQGS GALVTTFVFR VRNLPAALYK AMGGFATNGV NMTKLESYMV DGNFFATQFY
ADVDGHPEDR NLAFALDELK FFSREFRIVG VYPGHPFRAT FTER
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