Gene RPD_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3527 
Symbol 
ID4024041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3915781 
End bp3917160 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content69% 
IMG OID637963731 
Productleucyl aminopeptidase 
Protein accessionYP_570651 
Protein GI91977992 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0260] Leucyl aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0722387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCGT TCGCCACTGC CCCGGAACCG ACCGCGGTTC CGATTTCCTT CGTCACCAAA 
ACCGGCTGGG AGGCGCTGTG CGCGACGCTG CCGGAGGCCG CGCAGCGGTT TGCGCGCGCC
AATGGCTACA GCGGCAAGCC GGGGCAATTC CTCGCGCTAC CGACGCCTGA AGGCGATGTG
AGCCACGTCC TGTTTGGCCT CGACGAACCC GCCGCGCGCG CTTGCGATCC GTTTCGCGCC
GGGCAATTGC CGAGCCTGCT GCCGCCCGGC GTGTATCGCT TCGCCAATGC GCCGCACGAC
ACCCGGCTCG CGGTACTGGC GTTCGCGCTC GGCGCCTACA AATTCGGCCG CTATCGCAAG
GCCGAGCCGC CGGCCGTCAA ACTGGTCGTG CCGGAGGGCG TCGATGTCGC TGCGATCGAG
CGCGCCGTCG CGGCCGCCAC GCTGGCGCGG GATCTGATCA ACACGCCCTC GAACGACATG
GGCCCGGCCG AACTCGCCGA TGCCGCCCAG GCGCTGGCGC AGCGCTTCGA TGGAACGTTC
GACTGCATCG TCGGCGAGGA ACTGACGAAG CAGAACTTTC CGCTGATCCA CGCCGTCGGC
ATGGCGTCGG CGCGCGCGCC GCGGCTGATC GATATCGGCT GGGGCGACCC CTCGCATCCG
AAGGTGACGC TGGTCGGCAA GGGGGTCTGC TTCGACACCG GCGGGCTTGA TCTCAAGCCG
TCGAGCGCGA TGCTGATCAT GAAGAAGGAC ATGGGCGGCG CCGCCAATGC GCTGGCGCTG
GCCTCGATGG TGATGGACGC GAAGTTGAAA GTTCGGCTGC GCGTGCTGAT CCCCGCAGTC
GAGAACGCGG TCGCCGGCAA TGCGATGCGG CCGCTCGACA TCTTTCCGTC GCGCAAGGGC
CCGACGGTGG AGATCGGCAA CACCGACGCC GAGGGCCGGC TGGTGCTGGC CGACGCGCTG
GCGCTCGCCG ACGAGGAAGC GCCCGACCTC CTGATCGATC TCGGCACGCT GACCGGCGCC
GCGCGCGTCG CGCTCGGACC CGATCTGCCG CCCTACTACA CCAACGACGA GACGCTCGCG
CTCGATCTGG CGCGCTGCGC CAGGGCCGAG AACGATCCGC TGTGGCGGCT GCCGCTGTGG
GCGCCTTACG ATTCCTGGCT CGATTCCAAG GTCGCGAACA TCAACAACGC GCCGTCCGGC
GGCTTCGCCG GTTCGATCAC CTGCGCGCTG TTCCTGCAGC GCTTCGTCGA GGCGGCGAAG
AGTTGGCTGC ATGTCGACAT CTATGGCTGG ACGCCCAAGG CAAGGCCCGC GCGCCCCGAA
GGCGGCGAGT GCCAGGCCGC GCGCGCGATC TTCGCGCTGC TGAGCGAACG CTATGGCTGA
 
Protein sequence
MSSFATAPEP TAVPISFVTK TGWEALCATL PEAAQRFARA NGYSGKPGQF LALPTPEGDV 
SHVLFGLDEP AARACDPFRA GQLPSLLPPG VYRFANAPHD TRLAVLAFAL GAYKFGRYRK
AEPPAVKLVV PEGVDVAAIE RAVAAATLAR DLINTPSNDM GPAELADAAQ ALAQRFDGTF
DCIVGEELTK QNFPLIHAVG MASARAPRLI DIGWGDPSHP KVTLVGKGVC FDTGGLDLKP
SSAMLIMKKD MGGAANALAL ASMVMDAKLK VRLRVLIPAV ENAVAGNAMR PLDIFPSRKG
PTVEIGNTDA EGRLVLADAL ALADEEAPDL LIDLGTLTGA ARVALGPDLP PYYTNDETLA
LDLARCARAE NDPLWRLPLW APYDSWLDSK VANINNAPSG GFAGSITCAL FLQRFVEAAK
SWLHVDIYGW TPKARPARPE GGECQAARAI FALLSERYG