| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3511 |
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| Symbol | |
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| ID | 4024025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3901271 |
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| End bp | 3902719 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963715 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_570635 |
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| Protein GI | 91977976 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.621785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAA CCAATCTTTT GACCTCGTTT CAGGATTTCG GCCTCGCCGA TCCCATCTCC
CGTGCGCTTC AGGAAGAAAA CTACACCATC CCGACGCCGA TCCAGGCGCA GACCATTCCT
CTCGCCCTCG CCGGCCGCGA CGTCGTCGGC ATTGCCCAGA CCGGCACCGG CAAGACCGCC
TCTTTTGCGC TGCCGATCCT GCACCGCATC CTCGCGGACC GCATCAAGCC GCAGCCGAAG
AACTGCCGCG TTCTGGTGCT GAGCCCGACC CGCGAACTCT CCGGGCAGAT CCTCGACAGC
TTCAACGCCT ATGGCCGCCA CATCCGCCTC AGCTCCACGC TGGCGATCGG CGGCGTGCCA
ATGGGCCGCC AGGTCCGCTC CCTGATGCAG GGCGTGGAAG TTCTGGTCGC AACCCCGGGC
CGCCTGCTCG ACCTCGTGCA GAGCAACGCG CTGCGGCTCG GCCAGGTCGA GTTCCTGGTG
CTCGACGAAG CCGACCGTAT GCTCGACATG GGCTTCATCA ACGACATCCG GAAGATCGTC
GCCAAGCTGC CGATCAAGCG CCAGACGCTG TTCTTCTCGG CCACCATGCC GAAGGACATC
GCCGATCTCG CCGAGCAGAT GCTGCGCGAT CCGGCCCGTG TCGCGGTGAC GCCGGTGGCG
TCGACCGTGG AGCGCATCAA CCAGCGCGTG ATCCATCTCG ATCACTCCGC CAAGCCGGCG
ATGCTCGCCC AGATCCTGCA GCAGGACGGG GTCAACCAGG CGCTGGTGTT CACGCGCACC
AAGCATGGCG CCGACAAGGT GGTGAAGGGC CTGCAGCGCG CCGGCATCAC CGCTGACGCC
ATCCACGGCA ACAAGTCGCA GAACTATCGC GAGCGGGTGC TCGCGGCGTT CCGCACCGGT
GAGCTGCGCA CGCTGGTCGC GACCGATATC GCCGCGCGCG GCATCGACGT CGACGGCGTC
TCGCACGTCG TCAATTTCGA CCTGCCGAAC ATCCCCGAGA CCTATGTCCA CCGCATCGGC
CGCACCGCGC GCGCCGGCGC CGAGGGCACC GCGATCTCGC TGTGCGCCGG CGGCGAAGAG
GTCGGCTATC TGCGCGACAT CGAGAAGCTG ATCCGTGTCG CACTGCCGAA GGAAGACCAT
CGCACGCCGG GCGCCAAGCC GGCCCCGTCG ACGGCGCCGC AACGCGGCGG CCAGCGCAAT
GGCGGCTCGC CCTATCCGGC CCGCGGCGGC GACGCTGCGC CCGGATCGAA CGGCCCGCGG
CGCCGACGTC GCGCCGGCGG CCCGACGACC GGACGCCATG CGGACGCCCG CCATCCCGAA
GCCGCCCGCC ACGAACCCGC GGCGCGGCCG CAGCACGGCG GTCAGGCTGA AGGCTTGCAG
GGCGTCGCGT TTTTGCAGCG CAAAAATCGT CCCGCCCAAA AGACCACCAC TCAACGACCG
CAACGCTGA
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| Protein sequence | MERTNLLTSF QDFGLADPIS RALQEENYTI PTPIQAQTIP LALAGRDVVG IAQTGTGKTA
SFALPILHRI LADRIKPQPK NCRVLVLSPT RELSGQILDS FNAYGRHIRL SSTLAIGGVP
MGRQVRSLMQ GVEVLVATPG RLLDLVQSNA LRLGQVEFLV LDEADRMLDM GFINDIRKIV
AKLPIKRQTL FFSATMPKDI ADLAEQMLRD PARVAVTPVA STVERINQRV IHLDHSAKPA
MLAQILQQDG VNQALVFTRT KHGADKVVKG LQRAGITADA IHGNKSQNYR ERVLAAFRTG
ELRTLVATDI AARGIDVDGV SHVVNFDLPN IPETYVHRIG RTARAGAEGT AISLCAGGEE
VGYLRDIEKL IRVALPKEDH RTPGAKPAPS TAPQRGGQRN GGSPYPARGG DAAPGSNGPR
RRRRAGGPTT GRHADARHPE AARHEPAARP QHGGQAEGLQ GVAFLQRKNR PAQKTTTQRP
QR
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