| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3471 |
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| Symbol | |
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| ID | 4023985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3850432 |
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| End bp | 3851829 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963675 |
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| Product | amidase |
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| Protein accession | YP_570595 |
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| Protein GI | 91977936 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACA TCTGGCGACT GTCCGCGGCC GACCTGGCCG GCTTGATCCG CAAACGCGAG
GTCTCGGCGC GCGAAGCGAC GCAGGCTGCG CTGGATCGAC TCGACGCCGT CAATCCGGCG
ATCAACGCGG TGATCGATCA TCGCCCGGAC GATGCGCTGG CGCAGGCCGA TGCCGTCGAT
GCGTCGCTGA AGCGCGGCGA TGGCGCGGGT CCGCTCGCGG GCGTGCCGGT CACCGTCAAG
GTCAACATCG ATCAGCAAGG TTTCGCGACC ACCAACGGCG TGACGCTGCA GCGCGACCTG
ATAGCGGCAT CCAACAGCCC GGTGGTCGAC AATCTGCGCA AGGCCGGCGC AGTGATCGTC
GGCCGCACCA ATACGCCGGC GTTCTCCTAT CGCTGGTTCA CTTCCAACAA ACTACACGGC
GAGACGCTGA ACCCACGCGA TCCCTCGATC ACGCCCGGGG GGTCGTCGGG CGGCGCCGCA
GCGGCGGTCG CGGCCGGCAT CGGCCATATC GCGCATGGCA CCGATATCGC CGGCTCGGTG
CGCTATCCGG CCTATGCTTG CGGCGTGCAC GGCCTGCGGC CGACGCTCGG CCGGGTCGCC
GCCTACAACG CGTCGTCGCC GGAGCGATCG ATCTGTCCGC AGATCAGCGC GGTGTCGGGA
CCGTTGGCGC GCACGATCGG CGATCTTCGG ATCGCGCTCG CCGCGATGGC GCAGCCGGAC
GCGCGCGACC CGTGGTGGGT GCCGGCGCCG CTGGTAGGTC CCGCAATGCC GAAGCGGGCG
GCGCTGTGCA TCGCGCCCGA TGGCCTCCAT GTCGTTGCCG AGGTGCGTGA CGCCGTCATC
GACGCCGCGC GCCGGCTGGA GAAGGCCGGC TGGGCCGTCG AGGAATTGCA GAACGCGCCG
CCGCTGCGCG AAGCCGCCGA CCTGCAGACC AGGCTCTGGC TCGGCGACGG TTATCAGGCC
ATGCGCGAAG CCGCCGAGCG AGAGGGCGAC CCCGGCGCGC TGGCCTGCCT TGGCGGCAAT
CGCGACAAGG CGATCGACGA TCAGGCCGCT TATTCGAAGA TCCTGACCCG CCGCGCGACA
CTGACGCGCG ATTGGCAGCT GTTCTTCGAA CGCTACGCGG TGCTGCTGAT GCCGGTGTCG
GGCGAACTGC CGTTTCCGCA GCGGCTCGAT CTGAAGGACG AGGCGTCGTT CCAGCGGGTG
TGGGCGGCGC AGATGCCGCA GGTCGGAATC CCATTGATGG GGCTGCCCGG GCTGACAGTG
TCGACCGGGC TGGTCGGCCG CACGCCGGTT GGCGTACAGA TTGTTGCCGG CCGCTATCGC
GAGGATCTGT GCCTGCTGGC CGGCGAGGCG ATCGAGGCCG GCGGCACGCC AGCGTCGCCA
ATCGATCCGC TGCGTTGA
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| Protein sequence | MQDIWRLSAA DLAGLIRKRE VSAREATQAA LDRLDAVNPA INAVIDHRPD DALAQADAVD
ASLKRGDGAG PLAGVPVTVK VNIDQQGFAT TNGVTLQRDL IAASNSPVVD NLRKAGAVIV
GRTNTPAFSY RWFTSNKLHG ETLNPRDPSI TPGGSSGGAA AAVAAGIGHI AHGTDIAGSV
RYPAYACGVH GLRPTLGRVA AYNASSPERS ICPQISAVSG PLARTIGDLR IALAAMAQPD
ARDPWWVPAP LVGPAMPKRA ALCIAPDGLH VVAEVRDAVI DAARRLEKAG WAVEELQNAP
PLREAADLQT RLWLGDGYQA MREAAEREGD PGALACLGGN RDKAIDDQAA YSKILTRRAT
LTRDWQLFFE RYAVLLMPVS GELPFPQRLD LKDEASFQRV WAAQMPQVGI PLMGLPGLTV
STGLVGRTPV GVQIVAGRYR EDLCLLAGEA IEAGGTPASP IDPLR
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