| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3465 |
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| Symbol | |
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| ID | 4023979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3845220 |
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| End bp | 3846149 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963669 |
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| Product | senescence marker protein-30 (SMP-30) |
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| Protein accession | YP_570589 |
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| Protein GI | 91977930 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.391955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAACA TTCGCGTTCT CGCAACCGAT CTGGCATTTC CCGAAGGTCC GGTGGTGATG
CCCGACGGCT CGGTGGTGCT GGTCGAAATC CGCGCCCAGC AGCTCACGCG AATCTGGCCG
GACGGCCGCA AGGAAGTCGT CGCCAAGGTG CCGGGCGGAC CCAACGGCGC GGCGCTCGGC
CCCGACGGCA AGATGTACAT CTGCAACAAT GGCGGCTTCG GCTGGTTTCC GTCGCGCGGG
ACGATGATGC CCGGCGCGCC GGAGCCCCAC GAATATATCG GTGGTTCGAT CCAGCGGATC
GACCTGACCA GCGGCAAAGT CGAGACGCTG TTCGACAAAT GCGGCGAGCA CCCGCTGAAA
GGCCCGAACG ATCTGGTGTT CGATAGGCAC GGCGGCCTGT GGTTCACCGA CCTCGGCAAG
CGCCGCGCCC GCGATTTGGA TGTCGGCGCC GCCTATTACA TCAAGCCAGG CATGAAAGAG
ATCAGCGAGC AGGTGTTCGG CACGCTGCCG CTGAACGGCA TCGGCCTGTC GCCGGACGAG
ACCACAATGT ATGCCGCCGA GACGCCGACG GCGCGGTTGT GGGCCTACGA CATCGTCGCG
CCCGGCGAGA TCAAGCCGCG CGATGTGATC TATCGCGGCG AGAAGGGCAA GCCGATTGCC
GGCCTCGGCG GCTATCAGAT GTTCGACTCG CTCGCGGTCG AGGCGGGCGG CAATGTGTGC
GTCGCGACGC TGGTGTCGGG CTGCATTTCG GTGATCGCGC CGGATGGTTT GCTGGTCGAG
CAGGTGCCGA CCGGCGACCG CGTCACCACC AACATCGCGT TCGGCGGCCC TGAGCTGAAG
ACCGCCTACA TCACCTTGTC CGGCAAGGGC GAGTTGATCG CGATGGACTG GCCGCGGCCC
GGCCTGCCGC TGAACTTCCT GAACAAATAG
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| Protein sequence | MSNIRVLATD LAFPEGPVVM PDGSVVLVEI RAQQLTRIWP DGRKEVVAKV PGGPNGAALG
PDGKMYICNN GGFGWFPSRG TMMPGAPEPH EYIGGSIQRI DLTSGKVETL FDKCGEHPLK
GPNDLVFDRH GGLWFTDLGK RRARDLDVGA AYYIKPGMKE ISEQVFGTLP LNGIGLSPDE
TTMYAAETPT ARLWAYDIVA PGEIKPRDVI YRGEKGKPIA GLGGYQMFDS LAVEAGGNVC
VATLVSGCIS VIAPDGLLVE QVPTGDRVTT NIAFGGPELK TAYITLSGKG ELIAMDWPRP
GLPLNFLNK
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