Gene RPD_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3458 
Symbol 
ID4023972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3838888 
End bp3839310 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content66% 
IMG OID637963662 
Productrhodanese-like protein 
Protein accessionYP_570582 
Protein GI91977923 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.204377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGA CCATCACCCG TGGGATCAAG GCGCTGCTCG ACGAAGCCAA CGCGACGATC 
GAGACCCTGA CCACCGCCGA CGCGATCGCG CTTCAACAGG CGGGCTCCGG CGACGTGGTG
ATCGTCGACA TCCGCGACCC GCGGGAAATC GAGCGTGATG GCAGAATCCC CGGCTCGTTC
GCTTGCACCC GCGGCATGTT GGAGTTCTGG ATCGATCCGC AGAGTCCCTA CGCCAAGCCG
ATCTTTCAGG ACGACAAGAC TTTCGTGTTC TATTGCGCCG GCGGGCTGCG CTCGGCGCTG
GCGGCCAAGA CCGCGCAGGA CATGGGGCTG AAGCCGGTCG CGCATATCGA AGGCGGCTTC
GCCGCCTGGC GCGACGCCGG CGGTCCAGTC GAGGCCTGGC AGCCGAAGAA GCCGAAAGGC
TGA
 
Protein sequence
MPQTITRGIK ALLDEANATI ETLTTADAIA LQQAGSGDVV IVDIRDPREI ERDGRIPGSF 
ACTRGMLEFW IDPQSPYAKP IFQDDKTFVF YCAGGLRSAL AAKTAQDMGL KPVAHIEGGF
AAWRDAGGPV EAWQPKKPKG