| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3443 |
|---|
| Symbol | |
|---|
| ID | 4023957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 3826529 |
|---|
| End bp | 3827005 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637963647 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_570567 |
|---|
| Protein GI | 91977908 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4270] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.1066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC GTACCCCCAT GACTGAAGCG CACAGCACTG AAACTCACGC CACTGACATT
TCCCCTCACC CGACGTCCGA TTTGCATCGT GTCGTGATCC GCTGGGTCCT CGCGGCATTC
TTCGTCGCTG CCGGGGGCGC GCATCTCGCG GTGCCCGACA AGCTGCTGGC GATGACGCCG
TCCTGGGTGC CGTTCGCGCC GCAGGTGATC CTGGTGACCG GCCTGTGCGA ATTCGCCGGC
GCCATCGCGC TAGTGACGCG GCCGCTGCGC TGGTGGGCCG GCGTTGCGCT CGCACTGTAT
GCGCTGTGCG TCTGGCCGGC GAACATCAAG CACGCGATCG ACGGCATCGA CATCCCCGGG
ATGCCGAGTA GCTGGTGGTA TCATGGCCCA AGGCTGGCGG CGCAGCCCTT GATCATCTGG
GCGAGCCTCT ACGCTGCCAA TGTGACCGAC TGGCCGTTCC GTCGCCGCAC CAGCTGA
|
|---|
| Protein sequence | MTARTPMTEA HSTETHATDI SPHPTSDLHR VVIRWVLAAF FVAAGGAHLA VPDKLLAMTP
SWVPFAPQVI LVTGLCEFAG AIALVTRPLR WWAGVALALY ALCVWPANIK HAIDGIDIPG
MPSSWWYHGP RLAAQPLIIW ASLYAANVTD WPFRRRTS
|
|---|
| |