| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3438 |
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| Symbol | |
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| ID | 4023952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3822059 |
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| End bp | 3822625 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963642 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_570562 |
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| Protein GI | 91977903 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.259362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGATCC AGCACTTCGC CCCGCCCGCG CATATCCAGG CGCCGCCTTT GTCATTCGCG
GCGCGGACCG GCGATCTGCT GTTCATCTCC GGCATTCCCG GCTACGACGA CAACCGCCAA
TTGCCCGACG ATTTTGAAGC GCAGTTCGGT TTCGTCGTCG TCAATATCAC CCGCGTCCTC
ACCGAAGCCG GCGCGAGCCT GCGCGATCTC GTCAAGCTCA ACGTGCTGCT GACCCGCGCG
GCCGACGTTG CGCCGATGAA CAAGCTCTAC GCCCAAGGCG TTCGGCCCGG CGCCCTACCC
CGCACGCACC ACCTGCGTGG TCCAGGCGCT GCCCGACCCG AAGATGCTGA TCGAAATCGA
AGGCATCGCG TCGCTGGCGA AGTAAGCGGT CGACGCTCGT CGCGGCAGCG TCGTGATTGC
GCGCTCGGCG CTCGGGTTCG AGATTCCGGG GCGCGCTCGC CGCGCGCCCT TGATTTCCAG
ACCCGCTCTT CGCGGGGATC CGGCAGGCTT GCGGTTGACG CAGGGGCCAA TCGATCGCAT
GCTGACCGCC TGTTCCGCCC CTTCTGA
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| Protein sequence | MPIQHFAPPA HIQAPPLSFA ARTGDLLFIS GIPGYDDNRQ LPDDFEAQFG FVVVNITRVL
TEAGASLRDL VKLNVLLTRA ADVAPMNKLY AQGVRPGALP RTHHLRGPGA ARPEDADRNR
RHRVAGEVSG RRSSRQRRDC ALGARVRDSG ARSPRALDFQ TRSSRGSGRL AVDAGANRSH
ADRLFRPF
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