| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3404 |
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| Symbol | |
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| ID | 4023917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3784424 |
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| End bp | 3786226 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963609 |
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| Product | ABC transporter related |
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| Protein accession | YP_570529 |
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| Protein GI | 91977870 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00337035 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGTT CAACCGGCAA GAGCGCCGAC GCGATCCGCG TCGTGCTGTC CTTCGTCTTC
CGCCATTGGC GCAACCAGCC GGGCCGCATG GCCACGGTGG TCGCCGGCCT GCTGGGCGCC
ACCGTCGCCG ACCTGTTCAT GCCGCTGTTT TCCGGACATC TGGTTGACGC GGTCACCACC
GGCGCGTCCG ATCCCGACGC CCGCCGCGCG GCGTTCACCG CGTTCGGCGC CATCGTGGCG
CTCGGCCTGC TGGCGATGGT GTTGCGCCTC GTGGGGCTGC AGGCGATCGT GCCATTCACG
CTGAACATGA TGTCCGATGT CGCACGCGAC GCGTTCGCGC GGGTGCAGCG CTTCTCCACC
GACTGGCACG CCAACAGTTT CGCCGGCTCG ACGGTGCGCA AGATCACCCG CGGGATGTGG
GCATTCGATC TGCTCAACGA CACGCTGCTG ATGGCTTTGG CGCCGTCGCT CCTGGTGCTG
GTCGGCTCGA TGATCCTGCT CGGCCTGCAC TGGCCCTTGC TCGGCGCAGT GATCGCGCTC
GGCACTGTCG CCTATGTGAC GATGACGGTG CTGTTCTCCA CGCGCTACGT GGCTCCGGCT
GCGCGGACCT CCAACGTCTG GGACACCAGG GTCGGCGGGA CGCTGGCCGA TGCGCTGACC
TGCAACGCGG TGGTCAAGGC CTTCGGCGCC GAAACGCGTG AGGACACGCG GCTGGCAAGG
GCCGTTGCAC GCTGGCGGTC GCGGACGAGC CGCACCTGGT TCCGGTACAA CTACACGAGC
ACGGCGCAGC TCACGATCCT GCTGATCATT CGCGCCGCCG TCGTCGGCAG CGCGCTGTGG
CTGTGGCTGG ACGGCCAAGC CTCGGCAGGT GACGTCACCT ACGTGCTGAC CAGCTACTTT
ATCATCCACG GTTACTTGCG TGATATCGGC ATGCACATCA ACAATATGCA GCGCTCGATC
AACGACATGG AGGAATTGGT CGCGATTCAC GACGCGCCGA TCGGCATCGT CGACGCCGCC
GGTGCGCAGC CGATCCGCGT GCATGGCGGG CGCATCGTGT TCGAGGACGT GACGTTCCTT
TATGGCGGTC ACGCCACGCC GCTGTACGAT CGGCTCGCCG TGCAGATTGA CGCCGGTGAG
CGCGTCGGCC TGGTCGGCCG CTCCGGCTCG GGCAAAACCA CCTTCGTCAA GCTGCTGCAG
CGGCTCCATG ACGTCACCGC CGGCCGTATC CTGATCGACG GACAGGACAT CGCACTGGCC
ACCCAGCAAT CGCTGCGCAG CCAGATCGCG ATCGTGCAGC AGGAGCCGAT CCTGTTTCAC
CGATCGCTGG CCGAGAACAT CGCCTATGCC AGGCCCGACG CCAGCCTCGC GGAGGTCGAG
CAGGCGGCGC GGCTGGCCAA CGCCCATGAT TTCATCATGC GGATGCCCGG CGGCTACGGA
ACGCTGGTCG GCGAGCGCGG GGTCAAGCTG TCCGGCGGCG AGCGGCAGCG GGTGGCGTTG
GCTCGCGCAT TTCTGGCCGA CGCACCGATC CTGATTCTCG ACGAGGCGAC GTCCAGCCTC
GACTCCGAAT CCGAGATGCT GATCCAGCAG GCGATGGAGC GCCTGATGAA GGGCCGGACC
GCGATCGTGA TCGCGCATCG TCTGTCGACG GTGCGTAGCC TCGATCGCAT CCTGGTGTTC
GAGCGCGGTG ACATCGTCGA GCAGGGCACG CACGCGACGC TGGCGGCACG CCCGAACGGG
CTCTATCGCG GGCTGTTCGA GCGCCAAGCG ATGGAGAGCG GCCGGTTGTC TGCCGCGGAG
TGA
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| Protein sequence | MTRSTGKSAD AIRVVLSFVF RHWRNQPGRM ATVVAGLLGA TVADLFMPLF SGHLVDAVTT
GASDPDARRA AFTAFGAIVA LGLLAMVLRL VGLQAIVPFT LNMMSDVARD AFARVQRFST
DWHANSFAGS TVRKITRGMW AFDLLNDTLL MALAPSLLVL VGSMILLGLH WPLLGAVIAL
GTVAYVTMTV LFSTRYVAPA ARTSNVWDTR VGGTLADALT CNAVVKAFGA ETREDTRLAR
AVARWRSRTS RTWFRYNYTS TAQLTILLII RAAVVGSALW LWLDGQASAG DVTYVLTSYF
IIHGYLRDIG MHINNMQRSI NDMEELVAIH DAPIGIVDAA GAQPIRVHGG RIVFEDVTFL
YGGHATPLYD RLAVQIDAGE RVGLVGRSGS GKTTFVKLLQ RLHDVTAGRI LIDGQDIALA
TQQSLRSQIA IVQQEPILFH RSLAENIAYA RPDASLAEVE QAARLANAHD FIMRMPGGYG
TLVGERGVKL SGGERQRVAL ARAFLADAPI LILDEATSSL DSESEMLIQQ AMERLMKGRT
AIVIAHRLST VRSLDRILVF ERGDIVEQGT HATLAARPNG LYRGLFERQA MESGRLSAAE
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