| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3379 |
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| Symbol | |
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| ID | 4023891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3749123 |
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| End bp | 3750952 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963584 |
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| Product | peptidase M24 |
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| Protein accession | YP_570504 |
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| Protein GI | 91977845 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.379289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00212976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTCGAAG CGCATTTCCA GACCTTCGAT GAGCCGGAAC ATGGCGTCGC CCTGAGCGCT
CGGCTGGCCG CGTTCCGCGA GGAGCTGGCG CGCCGGACGC TCAATGGATT CATCGTTCCG
CGCGCCGATC AGCAGCAAAA TGAGTATGTT CCGCCGTCTG AAGAGCGGCT GGCCTGGCTC
ACCGGCTTCA CCGGATCGGC TGGTCTCGCA GTGGTGTTGA CCCATCAGGC CGCTGTGTTC
GTCGATGGAC GCTACACGCT GCAGGCGGCC AAGCAGGTCG ACGGCGAGGC GTGGACGATC
GAGTCGCTGG TCGAACCGCC GCCGGAGCGC TGGCTGGAGC AGCATCTGAA GCCGGGCGAC
CGCCTCGGAT TTGATCCGTG GCTGCACACT TCTTCGGCAG TGGAGCGAAT GCAGGCGGCC
TGCGCCAAGG CCGGCGCGGA GCTGATCGCA GTCGACGGCA ATCCTGTCGA CGCGGTGTGG
ACCGAACGCC CGGCCCCGCC GCTCGGCCAG GTCAGCGTCC ACGGCGTGGA GTTTTCCGGC
GAGAGCGAGG CCGCCAAGCT CGACCGGATC CGCAGCGAAC TCGACCGGCT GAAGGCCGAC
GCGCTGGTTC TGTCGGATTC GCACGCGGTG GCCTGGACCT TCAACATCCG CGGCGCCGAC
GTCGCCCATA CGCCGCTGCC GCTGTCCTAC GCGCTGGTGC CGACGCAGGG ACGGCCGACC
ATCTTCATCG ATGCGCGCAA GCTGTCGAAC AGCGCCCGCG ACCATCTCGA ACAGACCGCG
CAGGTGGCGG AGCCCTCGGC GCTGGCGCCG GCGCTGCAGG CGCTCGCCGC CAGCGGCGGA
GCGATCGCGC TCGACAGCGC CACCGCTGCA GACGCGCTGA CGCGGCTGAT TACCGAGGCC
GGCGGCAAGC CGCTGCGCGG CGCCGATCCG GTCGCGCTGC TGAAAGCGGT GAAGAACGTC
ACCGAAATCG AGGGCACGCG CACCGCGCAT CGCCGCGACG CCGTGGCGCT GGCGCGCTTC
CTGGCTTTCA TCGACCGCGA GGCGCCGAAA GGCACCCTCA CCGAAATCGA CGCCGTCGAA
GCGCTGGAGA CCTTCCGCCG CGACACCGGG GCGCTGAAGG ACGTCTCCTT CCCGACCATC
TCGGGCACCG GGCCGAACGG CGCGATCGTG CACTATCGCG TCACCCGCGC CAGCAACCGC
CGCATCCATC CCGGTGATCT GCTGCTGATC GATTCCGGCG CGCAGTATCA GGACGGCACC
ACCGACGTCA CCCGCACCAT CGCGATCGGC GAGCCGAGCG ATGAGATGCG CGACCGCTTC
ACCCGGGTGC TGCGCGGCCA TATCGCGATC GCGCGTGCGG TGTTTCCCGA CGGCGCCACC
GGCGCGCAAC TCGACACGCT GGCGCGGCAG TTCCTGTGGC AGGCCGGAAT CGATTTCGAC
CACGGCACCG GCCACGGCGT CGGCAGCTAT CTGTCGGTGC ACGAAGGCCC GGCGCGAATC
TCCAAGCTCG GCACGACGCC GCTGAAGCGC GGCATGATCC TGTCGAACGA ACCCGGCTAC
TACAAGACCG ACGGCTTCGG CATCCGGATC GAGAATCTCG AGCTGGTGGT CGAGGCGACG
ATCGACGGCG CCGAAAAGCC GATGAACGCA TTCGAGACGT TGACGCTGGC GCCGATCGAC
CGCCGCCTGA TCGACATCGA ACTGATCAGC GCCAAGGAAT TGGCCTGGCT GAACGACTAC
CACGCCCGCG TCCGGCGCGA GGTTCGCCCG CATCTCGATG GCCCGACGCA GCTATGGCTC
GACGAAGCGA CGGCGCCGCT GGAGCGGTGA
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| Protein sequence | MFEAHFQTFD EPEHGVALSA RLAAFREELA RRTLNGFIVP RADQQQNEYV PPSEERLAWL
TGFTGSAGLA VVLTHQAAVF VDGRYTLQAA KQVDGEAWTI ESLVEPPPER WLEQHLKPGD
RLGFDPWLHT SSAVERMQAA CAKAGAELIA VDGNPVDAVW TERPAPPLGQ VSVHGVEFSG
ESEAAKLDRI RSELDRLKAD ALVLSDSHAV AWTFNIRGAD VAHTPLPLSY ALVPTQGRPT
IFIDARKLSN SARDHLEQTA QVAEPSALAP ALQALAASGG AIALDSATAA DALTRLITEA
GGKPLRGADP VALLKAVKNV TEIEGTRTAH RRDAVALARF LAFIDREAPK GTLTEIDAVE
ALETFRRDTG ALKDVSFPTI SGTGPNGAIV HYRVTRASNR RIHPGDLLLI DSGAQYQDGT
TDVTRTIAIG EPSDEMRDRF TRVLRGHIAI ARAVFPDGAT GAQLDTLARQ FLWQAGIDFD
HGTGHGVGSY LSVHEGPARI SKLGTTPLKR GMILSNEPGY YKTDGFGIRI ENLELVVEAT
IDGAEKPMNA FETLTLAPID RRLIDIELIS AKELAWLNDY HARVRREVRP HLDGPTQLWL
DEATAPLER
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