| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3374 |
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| Symbol | |
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| ID | 4023886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3742868 |
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| End bp | 3745147 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963579 |
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| Product | hypothetical protein |
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| Protein accession | YP_570499 |
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| Protein GI | 91977840 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.252874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00751166 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGATC CGATGCCGCC CGCTGCCGCT CATAATTCCG AAGCGCGCAA CCGGGTGATC
CTGATCGTCT ACACCGGGGC GATCTTCACC AGCGCGTTGC TGCTGTTTTC GGTCCAGCCA
TTGTTCACCA AAATGGTGCT GCCCCGCCTC GGCGGTTCGC CGGCGGTGTG GTCGGTGGCG
ATGGTGTTCT TCCAGTCGCT GCTGCTCGGC GGCTACGCCT ATGCGCATTA CATCAGCCAG
TTCCGCAACC GCATCGTTCC CGTCGCGATT CATCTCGCGC TGCTGATCGC CGCGATGCTG
ACGCTGCCGC TGTCGATCGC CGGTGGTTGG GGCACGCCGC CCTCGAGCGG CTACGCGTTC
TGGTTGCTCG GCCTGTTTGC GGTGTCGATC GGTCTGCCGT TCTTTGCGCT TGCCGCCAAC
AATCCGCTGC TGCAGGCGTG GTTCGTACGC ACCGGCCACC CCAACGGACC CGATCCTTAT
TTCCTCTACG CGTCGTCCAA TATCGGCAGC TTCCTGGCGC TGTTGTCCTA TCCGGTGCTG
CTGGAGCCGA CGCTGACGCT GCGCTCGCAG AATATCGTGT GGACCGGCGG CTACGGCCTG
TTGATCCTGC TGATCGCCGG CTGCGGCTAC CTGCTGCTGC GCTCGCCGAA AATGGATATC
AGCGCGAGCA GCGACCAAAG CGCCGCCGCG GTCGCGCCGT CCTGGACGTT GCGTGCGCGC
TGGGTGTTTC TCGCCGCGGT GCCATCGGGT CTGCTGATCG CGGTCACCGC GCATGTCTCG
ACCGACGTCG CGGCCGCGCC GCTGCTATGG GTGCTGCCGC TGTCGCTGTA TCTGCTGACG
TGGGTGCTGG TGTTCCAGTC GCGGCCGCTG CTGCCGCACA AATGGATGCT GGCCGCGCAG
CCGGTCGCGA TCGGGGTGAT CGCCGTGCTG CTCGCCTATG CCGGCACCGC CAATCTGCTG
CTGATGCTCT GCGGCCATTT GGTGTCGTTC TTCGTGATCG CGATGGCCTG CCATGGCGAA
CTGGCGCGGA CACGTCCGGA CGCACGCCAT CTCACCGGCT TCTACGTCGC GCTGTCGTTC
GGCGGCATGG TCGGCGGGCT GTTTGCCGGC CTGGTCGCGC CTTACAGCTT CTCCTGGATT
GCCGAATATC CGATTCTGCT GGCGCTGGCG GTGCTGTGCC GGCCGAACAT GATCGAGCGG
GTTCCGGCCT GGACGCGCTG GTACTGGGCG TTCCTTGCCG CGCTTGCGGT AGCGCTGATC
GCGCCATCGT TCAGCGCCAA CAAGGTGTTC GAGTGGATCA GCATCAATCG CATGCTGATC
GTCGGCGACG TCGCCGCAGT GGCGGCCTTC GCGGCGCTGG CGCTGCGCGC CAGCCGCTGG
AAAGTGTTCG CCACCGTCGT GTTGGCGCTG ACGCTGATCC GGCTCTACCC CTCCGACGAC
GGAAAGGTCG AGACGGTGCG CAGCTTCTTC GGCGTTCACA AGATTCAGGT GACGTCGAAC
GGGCAGTATC ACGTGCTGCT GCACGGCACC ACGATCCACG GCGCCGAGAA AATGCTGAAT
GATGACGGCA CGCCCATCAG CGGCCGGCCG GAGCCGATCA CCTATTACTA CAAGGATGGC
GGCATCGGGC AGGGGATCGC GGCGATCCGC GCACGCAAGG GTGAGCCGCT GCGTGTCGCG
GTGATCGGAC TCGGCTCGGG ATCGCTGACC TGCGCCGCGC AGCCGGGCGA GACTTGGCGG
TTTTTCGAGA TCGACCAATC GATGGTCGAT ACCGCGCGCG ATCCGAAATA CTTCACCTAT
GTGAGCAAAT GCGCGCCCGA CCTGCAGCCG GTGATGGGCG ACGCGCGGCT GACCTTCGCC
AACGAGCCGG ACGGCGCCTA CGATCTGATC GTGGTCGACG CCTATTCGTC GGACGCGATC
CCGATCCATC TCGCGACCCG GGAGGCGATG GCGATCTACA AGTCGAAGCT GGCGCCGCAG
GGCGCGGTGC TGATGCACGT CTCCAACCGG CATCTCGAAC TGGCAAGCGT GGTGGTCGGC
ATCGCCGGCA CCAACGGCAT GAAGAGCTGG ACCTATTCCG ACGACCCGGA GCGCGACGCC
GACTATATTT TCGCGACGTC CGTGGTGATC TCGGCGCGGC AGCCCGATGA TGTCGGTTCG
ATCGCCTCGT CGCAGGACTG GACCCTGACC GAGCCGCGCC CTCATCAACG GGTCTGGACG
GACGACTATT CCAACGTGCT CGGCGCGGTG TGGCGCCGGC TGCGCGAGGG CGACGAATAG
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| Protein sequence | MTDPMPPAAA HNSEARNRVI LIVYTGAIFT SALLLFSVQP LFTKMVLPRL GGSPAVWSVA
MVFFQSLLLG GYAYAHYISQ FRNRIVPVAI HLALLIAAML TLPLSIAGGW GTPPSSGYAF
WLLGLFAVSI GLPFFALAAN NPLLQAWFVR TGHPNGPDPY FLYASSNIGS FLALLSYPVL
LEPTLTLRSQ NIVWTGGYGL LILLIAGCGY LLLRSPKMDI SASSDQSAAA VAPSWTLRAR
WVFLAAVPSG LLIAVTAHVS TDVAAAPLLW VLPLSLYLLT WVLVFQSRPL LPHKWMLAAQ
PVAIGVIAVL LAYAGTANLL LMLCGHLVSF FVIAMACHGE LARTRPDARH LTGFYVALSF
GGMVGGLFAG LVAPYSFSWI AEYPILLALA VLCRPNMIER VPAWTRWYWA FLAALAVALI
APSFSANKVF EWISINRMLI VGDVAAVAAF AALALRASRW KVFATVVLAL TLIRLYPSDD
GKVETVRSFF GVHKIQVTSN GQYHVLLHGT TIHGAEKMLN DDGTPISGRP EPITYYYKDG
GIGQGIAAIR ARKGEPLRVA VIGLGSGSLT CAAQPGETWR FFEIDQSMVD TARDPKYFTY
VSKCAPDLQP VMGDARLTFA NEPDGAYDLI VVDAYSSDAI PIHLATREAM AIYKSKLAPQ
GAVLMHVSNR HLELASVVVG IAGTNGMKSW TYSDDPERDA DYIFATSVVI SARQPDDVGS
IASSQDWTLT EPRPHQRVWT DDYSNVLGAV WRRLREGDE
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