| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3363 |
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| Symbol | |
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| ID | 4023875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3727093 |
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| End bp | 3731019 |
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| Gene Length | 3927 bp |
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| Protein Length | 1308 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637963568 |
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| Product | AsmA |
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| Protein accession | YP_570488 |
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| Protein GI | 91977829 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0210468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGACGA CGTTGCTCGG TCTGGCCATT GCGCTGATTC TCGCGCTGCT CGCGGCCCTG
GTGGGGCCGT ATGTCATCGA CTGGAACCAG TTCCGAGATC AGTTCGAGGC TGAAGCCACG
CGGCGCGCCG GCGCTCCCGT CCGGGTGGCC GGCGAACTGG ATGCGCGGCT GCTGCCGACG
CCGACGCTGC GGCTGCGCGA CGTCACGATC GGCGGCGCCA ACGATCCCGG CCGGATCCGC
GCCGCCAAGC TCGACGTCGA GTTCAGCCTC GGCGCGCTGA TGCGCGGGGA GTGGCGCGCC
GACGTCCTCA CAGTCAACGG CTTCGCGCTC GACCTCGGGC TTGATTCCAA GGGGCGGCTC
GACTGGCCCG CTTCCGGCCT CTCCAATCTT GCGGCGCTGT CGATCGATCG GCTCAATCTG
ACCGGACGGA TCGCGCTGCA CGATGCCGCC AGTCGCTCCA CGATCGAACT CGGCGACATC
GCCTTCGCCG GCGACTTGCG CGCGCAGGGC GGCTCGCTGC GGGGCGACGG CAATTTCCTG
TTGGACAGCA CGCGCTACCC GTTCCGTCTG TCGGCCGGCC GCGCAACCGA TGGCGACGGC
ACGCGGCTGC ACATCACCAT CGATCAGGCC GGCCGTGGCA TGTCCGCCGA TCTCGACGGG
CTGCTTGCCT TCGACGATCG GTCACCACGG TTCGACGGCA CGGCGGTGCT GTCGGCTTCG
GCGGTTGCGA CCAACCCGGC GCGAACGCCG TGGCGGATCT CGGCGAAGGT CAAGGCGGGT
CCTGCGCTGG CGGCGCTCGA TCAGCTCGAG GCGTCGTGGG GCGCGGAGGA TCGCGCGCTG
AGACTCGCCG GCTCCGGCGA TCTTCGCTTC GGAGCCTCAC CGCTGCTCAC GGCTAAACTG
TCGGCTCGCC AGCTCGACGG CGACAGGCTG CTGGCCAAGG ACGGCGATGG CTCGGCAATT
TGGCTGCCGC AGCTCCGCGA ACGAATCGGC GCGCTGCCGC AGCCGCCGCT GCCGGTACGG
ATCGTGCTCG ATGCCGAGCA GATCATGCTC GGCGGCCGGC CGCTGACCGA TATCGCCGTG
GAGCTGCGCT CAGACGGAGA AGCGTGGCGG CTCGACCGGC TCGGGCTGCG GGCGCCGGGC
GGTTCGCGGC TGGCGCTGAG CGGCGGGGCA GGGCCGGCCG GCACGGCCGA ACAGTTCAAA
GGCGCGCTGA CGATCGACTC CGCCGATCCC GATCTGCTCA CCGCCTGGCT GCAGGGCCGG
TCACCGGCCG CCGGCAGCAC GCCGAAGCCG CTGCGGGTGC AGGGCAGCGT CACGGCTTCG
ACTGAGAGCA TTGCGATCGA TCCGCTGAAG ATCGAGGCCG ATGGCGGCAC GCTGCAAGGC
CTCGTCGCCT ATCGCAACCC CACCGCCGAC CATGGCGGGC GGGTCGAAGC CGTGCTGAAA
GGCGACCGCG TCGATCTCGA CACCGCGACG GAGCTGACGC GCTCGCTGGC CGGGCCACGC
GACAACTGGC CGGAGCAGGC CAGCGTCTCG CTTGATTTCG GCGAGGCCAA ATCCAACGGC
CAGATCTGGC GGCCGCTGCG GGCGCATTTC GGCTACGGAC TTGGCACCGT GTCGCTCGAC
CAGCTCGAGG CCAGAAGCGC GAGCGGCGTC ACGCTGCGGG GCGACGGTGC GCTCGATCGC
GGCAACGGCG TCGGCCGGCT CAATCTGGCG GCGCTCGCGC CGTCGCTGCG GCCGATTGCC
GACGCGCTCG ATCCCATTGC ACCGAGGATC GCCGCGCCGC TGAAGACGAT CGGCGATGCG
CCCGGCACGG CGCAAGTGTC GCTCGCTCTG ACGCTCGCTG CCGACAAGAC CAATGCCGGG
CAGGTCAAAG CCGAAGCGGT GGTGCAGATC GATAGCCGGC CGCTCAAAGG CAGCGTCACC
CTGAAGGCGA TGCCGAGCAG CGCCGACATC GGCGATCTCA AGACCGATGC GCTCAGTCGC
AGCGACGTCA GCTTCGACGG CAGATTGTCG GCTGAGCGCG GCGCGTCGTT GCTGACATTG
CTGGGGCTCG ATCGGGCGCT CGCAGCCGGC GACGGCGGCG GCGCGCTCGA CGCCTCGGCG
ACCGGCGCAT GGGGTGCGCC GCTGAAGCTG AAGGGGCGTC TCACCGGAGC GGCGTTCGAC
CTCGAGGCCG ATGGCCGGGT CGATCCGTGG GCAGCCGAGC ACAAGGCCGA GCTGTCGCTG
AATGCGCGTC GGCTCGATCT GGCGCCGTTG CTCGACCTCG CCGGCTCTGG CGCGGATGCG
GCGAGGATCA GCGCGACCTC GCGCCTCACG GTGGCCGGCC GGCAATGGAG CCTCAACGAT
ATCGACGCCG GCCTTGGTGG CTCGCGGCTG CGCGGGCGGC TGGCGCTGAC GCTCGGCGAC
GAGATCGCGG TCGACGGCGA GGCGGGGCTC GACATGCTCG CGCTGGGGCC GGCGCTGCAA
TTGGCGCTCG GCGTCACCGG CCACGATCCG GCGGAGCCGC TCGGCCGCGG TCTGCTGCGA
GGCTGGCGCG GCAAACTCAG TTTTCAGGCG CTGCGCGCGT TGCTGCCGGG CGGCGCCGAA
TTGCAGCCGT TCGGCGGCGT GCTGCGCCAC GATGGCCGGA CGCTGACGCT CGACGCCAAG
GGCAAGCTCG GCGGCGGCGA CACCAAACTG GTGATCCATG CGAAGCCCGG CGATGCCGGC
GTCGCACTCG ATGCCAATGT CGCGGTGTCC GGCGCCGATG CCACAGCGCT GCGCTACGGC
GACCAAATGA TGCCGGCGGC GAAGGCGTCG CTGCAGATGA CGCTCGACAG CACGGGGCGC
AGCGCGTCGG CGTTGAGCGG GGCGCTGGCC GGCGGCGGGA CGCTGACGCT GGAGCGGGCG
CAGATTCCGG GACTCGACCC CAAGGCGTTC GATGTCGCGT TGCGCGCCGG CGATCAGGCC
AAGCCGATCG ACGATTCGAG CCTCGCGAAG ATCATCGAGC CGGTACTGGC GGGCGGGACG
CTGGCGGTGG ACAGCGTCCA GTTTCCGATC AGTCTCGCCG ACGGGCGGCT GCGCGTTGCG
GCGACGACAC TGACGGCCAA GGGAGCCCGC GCGGTGATCT CCGGCGGCTA CGACATTCCA
GCCGGTCAGG CCGATCTCCG CGCCACGCTC GCGATGACTG GTGCCGCACC CGGCCTGCCG
CCCGAAATCC GGATTTTTGC GGCCGGGCCG CCGGAGCGGC TGACGCGCAA TGTCGATCTG
TCGGCGCTGT CGTCCTGGCT TGCGGTGCAA CGGATCGATC GCGAGACCAA GAAGCTGCAA
AGTCTGGAGC AGGACTTGAA GCCGCCGGTG ATTCCCGCCT CGCGTCCGGT GGACACGTCG
CCCGGTCCGC CGCCCTCCGA CAAGCCGACC AGCGCGGTCC CGCCGGGCAC GCGCGCAGGT
GAGTCGGGAC TATCAGCGGC AAAGCCGGGT GGTGTGTCGC AGCCGTCGGC GACAGCAAGT
CCGGGGAAGG GGAATTCCGC AACCACAGCG ACGCGATCGG GGACAGGGCA AACCGGAGAC
GCGCCAAATG CGCCGGGAAC CTCTGCGCCA GTGACCTCCG CGCCGGGGGG CTCTGCGCCC
GTGCTATCCG CGCCCGCGCC TGTGACACCG CCGGTCCGAT CGCCGCCCGG CGGATCGCCG
CAGGTCGTGG CGCCAGCTGT GGTGCCGCTG CCGGACGCCG ATCCGCGCCG CGCAACGCCG
TCGCAGCCGC GCCCGACGAC GCTCAAGCCG CCGCCGACTC AGCCGCCACC CTCAGCGTCG
ATGACGGGCA TCAACAGTCC GCGCGAAAAG CTTTCGCCGC TGCCGCCCGC CGTGGAAATC
AAGCCTCTAC CAGGCGACGC GCGACCGTCC CGGCCGCGCC CGCCATTGGT ACTAACGCCC
CCGAACAACT CGCGGGCGGC CGACTAA
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| Protein sequence | MQTTLLGLAI ALILALLAAL VGPYVIDWNQ FRDQFEAEAT RRAGAPVRVA GELDARLLPT
PTLRLRDVTI GGANDPGRIR AAKLDVEFSL GALMRGEWRA DVLTVNGFAL DLGLDSKGRL
DWPASGLSNL AALSIDRLNL TGRIALHDAA SRSTIELGDI AFAGDLRAQG GSLRGDGNFL
LDSTRYPFRL SAGRATDGDG TRLHITIDQA GRGMSADLDG LLAFDDRSPR FDGTAVLSAS
AVATNPARTP WRISAKVKAG PALAALDQLE ASWGAEDRAL RLAGSGDLRF GASPLLTAKL
SARQLDGDRL LAKDGDGSAI WLPQLRERIG ALPQPPLPVR IVLDAEQIML GGRPLTDIAV
ELRSDGEAWR LDRLGLRAPG GSRLALSGGA GPAGTAEQFK GALTIDSADP DLLTAWLQGR
SPAAGSTPKP LRVQGSVTAS TESIAIDPLK IEADGGTLQG LVAYRNPTAD HGGRVEAVLK
GDRVDLDTAT ELTRSLAGPR DNWPEQASVS LDFGEAKSNG QIWRPLRAHF GYGLGTVSLD
QLEARSASGV TLRGDGALDR GNGVGRLNLA ALAPSLRPIA DALDPIAPRI AAPLKTIGDA
PGTAQVSLAL TLAADKTNAG QVKAEAVVQI DSRPLKGSVT LKAMPSSADI GDLKTDALSR
SDVSFDGRLS AERGASLLTL LGLDRALAAG DGGGALDASA TGAWGAPLKL KGRLTGAAFD
LEADGRVDPW AAEHKAELSL NARRLDLAPL LDLAGSGADA ARISATSRLT VAGRQWSLND
IDAGLGGSRL RGRLALTLGD EIAVDGEAGL DMLALGPALQ LALGVTGHDP AEPLGRGLLR
GWRGKLSFQA LRALLPGGAE LQPFGGVLRH DGRTLTLDAK GKLGGGDTKL VIHAKPGDAG
VALDANVAVS GADATALRYG DQMMPAAKAS LQMTLDSTGR SASALSGALA GGGTLTLERA
QIPGLDPKAF DVALRAGDQA KPIDDSSLAK IIEPVLAGGT LAVDSVQFPI SLADGRLRVA
ATTLTAKGAR AVISGGYDIP AGQADLRATL AMTGAAPGLP PEIRIFAAGP PERLTRNVDL
SALSSWLAVQ RIDRETKKLQ SLEQDLKPPV IPASRPVDTS PGPPPSDKPT SAVPPGTRAG
ESGLSAAKPG GVSQPSATAS PGKGNSATTA TRSGTGQTGD APNAPGTSAP VTSAPGGSAP
VLSAPAPVTP PVRSPPGGSP QVVAPAVVPL PDADPRRATP SQPRPTTLKP PPTQPPPSAS
MTGINSPREK LSPLPPAVEI KPLPGDARPS RPRPPLVLTP PNNSRAAD
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