| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3296 |
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| Symbol | |
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| ID | 4023806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3649002 |
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| End bp | 3650417 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963500 |
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| Product | amidase |
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| Protein accession | YP_570421 |
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| Protein GI | 91977762 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.297102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0238145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACG GCGTGATGAA CAAGGCCACC GCGCTACACG CGCTCTCCGC CACCGAGCTG
CTCGCCGGCT ACTACGCCAA GCAGTTCTCG CCGCTCGACG TGATCGACGA TGTGATCGCC
CAAATCGCGC GCTGGGAGCC GCACATCAAG GCGCTGTATG CGTTCGATCC CGACGGCGCC
CGCGCCGTGG CGAAGGCCTC CACCGAACGC TGGCGCAACA GCGATCCGAT CGGCCCGCTC
GACGGCGTGC CGGTGACGAT CAAGGAGAAC CTCGCGACGC AAGGCACGCC GGTGCCGCTC
GGCGCGGCGA CGACCCGGCT CGCGCCGGCG CCGGCCGATG CGCCGCCTTC GGCGCGGCTG
CGCGAAGCCG GTGCGGTGAT CTATTCCAAG ACCACGATGC CGGATTTCGG GATGCTGTCG
TCGGGGCTGT CGAGCTTCCA CGGCATCACG CGCAATCCCT GGGATCTGAC GCAGAACACC
GGCGGCTCGT CCTCGGGGGC CGGCGCGGCC GGCGCTGCGG GCTACGGGCC GCTGCATCTC
GGCAGCGATA TCGGCGGCTC GGTGCGGCTG CCGGCGAACT GGTGCGGCCT GTTCGCGCTG
AAGCCGTCGC TCGGCCGCGT GCCGATCGAT CCGCCTTATG TCGGCCGCTG CGCCGGGCCG
ATGACCCGCA CCGTCGACGA CGCCGCGCTG ATGATGAGCG TGCTGTCGCA GCCCGATGCG
CGTGACGGCA TGAGCCTGCC GCCGCACGAT TTCGCGTGGC ACGATCTGGC GATCGATCTG
CGCGGAAAGA AACTCGGGCT CGTCACCGAT CTCGGCTTCG GGCTGGCGCT TGAAGACGAG
GTGCGCGACG TCGTGGTGAA AGCCGCGCGC GCATTCGAGG CGCAAGGCGC GATCTTGCAG
GAGGTTCAAC TCGGCTTCAC CCGCGCGATG ATGGACGGGC TCGACAATTT CTGGCGGGCG
CGGCTCTGGG ACGATCTCGC ACAGCTCAGC GACGAACAGC GCAGTCAGGT GCTGCCTTAC
ATCTATCGCT GGGCCGAGCG AGGCGCGCAG CTGACCGGCG TCGAGGTGAT GCGCGGCTTC
AACATGACGA TGGCGGTCCG CGCGATCGGC GCGGAGCTGT TCGCGGATAT CGACTACCTG
ATCTCGCCAG TCGCGCCGGT CGTCAGTTTT CCCGCCGAGC GCGCCTCGCC GCTCGACGAT
CCCGACAAAC CGTTCGATCA CATCCTCTAT ACCGTGCCAT GGAATATGGC CGAGAACCCG
GCCGCGTCGA TCAATGGCGG CTACAGCGCG AAGGGCTTTC CGATCGGCGT GCAGATCGTC
GGACGCAGGT TCGACGATCT CGGCGTCCTC AAAATGGCAA AAGCGTTCGA AGGCCTGCGC
GGCCGACAGC TTCCATGGCC CGAGCCGCCG CGCTGA
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| Protein sequence | MSDGVMNKAT ALHALSATEL LAGYYAKQFS PLDVIDDVIA QIARWEPHIK ALYAFDPDGA
RAVAKASTER WRNSDPIGPL DGVPVTIKEN LATQGTPVPL GAATTRLAPA PADAPPSARL
REAGAVIYSK TTMPDFGMLS SGLSSFHGIT RNPWDLTQNT GGSSSGAGAA GAAGYGPLHL
GSDIGGSVRL PANWCGLFAL KPSLGRVPID PPYVGRCAGP MTRTVDDAAL MMSVLSQPDA
RDGMSLPPHD FAWHDLAIDL RGKKLGLVTD LGFGLALEDE VRDVVVKAAR AFEAQGAILQ
EVQLGFTRAM MDGLDNFWRA RLWDDLAQLS DEQRSQVLPY IYRWAERGAQ LTGVEVMRGF
NMTMAVRAIG AELFADIDYL ISPVAPVVSF PAERASPLDD PDKPFDHILY TVPWNMAENP
AASINGGYSA KGFPIGVQIV GRRFDDLGVL KMAKAFEGLR GRQLPWPEPP R
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