Gene RPD_3262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3262 
Symbol 
ID4023771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3617651 
End bp3618226 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content69% 
IMG OID637963465 
Productnitroreductase 
Protein accessionYP_570387 
Protein GI91977728 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.561471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0279896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGAG CAAACACCGA AGTCACCGAC TTCCTCAAGA CCCGCCGTTC GGTGAAGCCG 
CGTGAGATGA GCGGGCCCGG TCCCTCGCCC GAGGAGCTGG ACACCATCCT CACCGTCGGC
GCGCGGGTGC CGGATCACGG CAAGATCGCG CCGTGGCGGT TCATCGTGTT CGAGGGCGAC
GCCGGCGCGC GCGCCGGCGA GGTGATCGGC GAGGTGTTTG CGCGCAACAA GCCGGAGGCC
ACGCCCGAGG AGATCGCAGC CGAGCGCGCC CGCCTCACCG AAGCGCCTTT GGTGATCGCG
GTGGTGAGCG CGCCGAAGCC GCATCCGAAG GTGCCGGCCT GGGAGCAGGA ATTGTCGGCC
GGCGCCGCCT GCCTCAACAT CGTCACCGCC GCCACCGCAC TCGGCTACGG CGCCAACTGG
CTGACCGGCT GGATCGCCTA TGACCGCGAC GTGCTGACCG GTCTCGGACT GAAGGATGGT
GAACAGCTCG CCGGCTTCAT CCATATCGGC ACACCGACCC GAGCCAACGA AGACCGCCCG
CGGCCGACGC TGGCGGAGAT CGTGACGAGG TTCTGA
 
Protein sequence
MARANTEVTD FLKTRRSVKP REMSGPGPSP EELDTILTVG ARVPDHGKIA PWRFIVFEGD 
AGARAGEVIG EVFARNKPEA TPEEIAAERA RLTEAPLVIA VVSAPKPHPK VPAWEQELSA
GAACLNIVTA ATALGYGANW LTGWIAYDRD VLTGLGLKDG EQLAGFIHIG TPTRANEDRP
RPTLAEIVTR F