Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3262 |
Symbol | |
ID | 4023771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3617651 |
End bp | 3618226 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637963465 |
Product | nitroreductase |
Protein accession | YP_570387 |
Protein GI | 91977728 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.561471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0279896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAGAG CAAACACCGA AGTCACCGAC TTCCTCAAGA CCCGCCGTTC GGTGAAGCCG CGTGAGATGA GCGGGCCCGG TCCCTCGCCC GAGGAGCTGG ACACCATCCT CACCGTCGGC GCGCGGGTGC CGGATCACGG CAAGATCGCG CCGTGGCGGT TCATCGTGTT CGAGGGCGAC GCCGGCGCGC GCGCCGGCGA GGTGATCGGC GAGGTGTTTG CGCGCAACAA GCCGGAGGCC ACGCCCGAGG AGATCGCAGC CGAGCGCGCC CGCCTCACCG AAGCGCCTTT GGTGATCGCG GTGGTGAGCG CGCCGAAGCC GCATCCGAAG GTGCCGGCCT GGGAGCAGGA ATTGTCGGCC GGCGCCGCCT GCCTCAACAT CGTCACCGCC GCCACCGCAC TCGGCTACGG CGCCAACTGG CTGACCGGCT GGATCGCCTA TGACCGCGAC GTGCTGACCG GTCTCGGACT GAAGGATGGT GAACAGCTCG CCGGCTTCAT CCATATCGGC ACACCGACCC GAGCCAACGA AGACCGCCCG CGGCCGACGC TGGCGGAGAT CGTGACGAGG TTCTGA
|
Protein sequence | MARANTEVTD FLKTRRSVKP REMSGPGPSP EELDTILTVG ARVPDHGKIA PWRFIVFEGD AGARAGEVIG EVFARNKPEA TPEEIAAERA RLTEAPLVIA VVSAPKPHPK VPAWEQELSA GAACLNIVTA ATALGYGANW LTGWIAYDRD VLTGLGLKDG EQLAGFIHIG TPTRANEDRP RPTLAEIVTR F
|
| |