| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3260 |
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| Symbol | |
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| ID | 4023769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3614244 |
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| End bp | 3615362 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963463 |
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| Product | major facilitator transporter |
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| Protein accession | YP_570385 |
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| Protein GI | 91977726 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.435908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.03191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGCA ATTTCGTCAC CGGAACCTCG GTTCTGGCGC CGGCCGGGAT GCTCGGCGAA
TTGTCCGCCG ATCTCGGCGT CACCATCGCT GAGGCGGGGT TGTTGATCAC CTTCGGCGCG
GTGGTGCTGT GCATCGGCTC GCCGCTGACG GCATGGCTGA CCAGCCGGAT CGAGCGCCGC
CTGCTGCTCA CCGCGACGCT GCTGGTGATG ACGCTGGCGA ATTTCGCCTC CGCGCTCGCG
CCGGGCTATG CCGCGCTGTT GATCATCCGC CTGATCAGCC TGTCGGTCGG CTCGCTCTAC
ACCCCGCAAT CGGCCGGCGC CGTCGCGCTG ATCACGCCGC CGGAGCGGCG CGGCGGCACC
ATGACCTTTG TGTTCCTGGG CTGGTCGCTG GCTGTGGCGT TCGGCGTGCC GCTGGTCACC
TATGTCGCCA GCCATTACGG CTGGCGCGCC GCTTTTGTCG TGCTGGGCGC GCTCGGCTGC
CTCAGCGTCG TGCTGCTGGC GCTGCGGCTC CCCGGCGGCT TGAAGGCGAC GCCGGTCGAC
CTGCGAACCT GGGTCGCGGT CGGCCGCAGC CGTCCGATCC TGACGCTGCT CGGTATCACC
GCGCTGCACA CGTCCGGCCA GTTCGTGGTC TTCACCTATA TCGGCCCGCT GCTGCTGGGG
CTCACCGGCG CCGGGGCGGC GCAAATCGGG CTGGCCTTCG CGCTGTATGG CGTTGGAGGT
TTCGTCGGCA ACATGATCGC AAGCCGCATC GTCGACGGCT GGGGCGCGTT CAACACATCG
GTGCTGTTCG TGTCGCTGAT GCTGACCGGA ATCACGCTGT GGTCGGTCGG CGCCGGCATC
TACGCCGTGA TGGCGCTCGG CGTGGCGATC TGGGGGCTCG GTTTCGCTGC GACCAATTCG
ATGCAGCAGG TGCGGCTCGT GGCCGCGGAT CCGTCGCTCG CCGGCGCCAC GATGTCGCTC
AATACGTCGG TGCTCTATGT CGGCCAGGCC ATCGGCTCGG CGATCGGCGG CGCATTGTTC
GCGGCGGGTC TGCCGCGCGT CGCCGGCTTC GCCGCAATGG CGCTGATCGC GCTGGCGCTC
GCCGCGGTGC TGCTCGCAAC GCGCGAGCGA AAAGGGTAG
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| Protein sequence | MLGNFVTGTS VLAPAGMLGE LSADLGVTIA EAGLLITFGA VVLCIGSPLT AWLTSRIERR
LLLTATLLVM TLANFASALA PGYAALLIIR LISLSVGSLY TPQSAGAVAL ITPPERRGGT
MTFVFLGWSL AVAFGVPLVT YVASHYGWRA AFVVLGALGC LSVVLLALRL PGGLKATPVD
LRTWVAVGRS RPILTLLGIT ALHTSGQFVV FTYIGPLLLG LTGAGAAQIG LAFALYGVGG
FVGNMIASRI VDGWGAFNTS VLFVSLMLTG ITLWSVGAGI YAVMALGVAI WGLGFAATNS
MQQVRLVAAD PSLAGATMSL NTSVLYVGQA IGSAIGGALF AAGLPRVAGF AAMALIALAL
AAVLLATRER KG
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