Gene RPD_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3254 
Symbol 
ID4023763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3608614 
End bp3610077 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content65% 
IMG OID637963457 
Productsulfatase 
Protein accessionYP_570379 
Protein GI91977720 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.233953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGATAC CTTCCATTGC CGACTACTCG ACCGCGATTG ACGGTCGACT CCTGGCCGCG 
CGGTCGGCCC GCTTCGTCCA CGCGAACATC CGGCTCATCG CCGGCGGGCT GTTGATCCCG
AACCTGCTGT CGCTGGCGAC GATGATCTCG CTGATCGATA TCGGCCTGCC GCCGCGCACC
GAGGCGATCC TGTTTTACGC ATGCGTGGCC ATGCTGGCCC GGCGCCTGCC GTTCGTCATC
ATCGTTCCGC TGTTCCTCAC GGTGCTGAGC TTCGACATCG TGCGCACGTT GTCGTTGATG
TTCAGCGTGG CGCCCGTCGA GTTCTTGGAG GCGATCGATC GTGCGCAGCG GATCCAGTTC
TTTGCCTCGC CATTGTATGT CGCCCTGATC GTCACGATCG CGGCGACGAC TGTCGCGGCG
CTGGTCTGCC TCAGCCGCCG CTCTGCGCTG ACGAACGCGA GCGCGCCGGC ATTCTTTGTT
CTGGCGCTGG GCGTCGCGGC GATCGACTTC ATCGGCAATG TTTCGCCGCA CTATCATTTC
GGGGCGACCA TTGGCTTCGA GCAGCCGGTT CAGTCGGCCG CGGAAGCGTC CGGCTTCAAG
CAGACGGCCG GCGCGGAAGG CCGCAACGTC GTGCTGGTGA TGGTCGAAAG CCTCGGCTAT
CTGCGCGATC CCGCAGCGCG CCAGCGGATC GCCGCGCCGC TGTACGATCC GGCCTTGACG
AGGGACTACG CTGTCACCTC GGGGCAGACG GTGTATTACG GTTCGACGAC CTCGGGCGAG
ATGCGAGAGC TGTGCGATAC GCGTTCGTTC TACAAGGACT TCGTTCAGCA CGACACCGAC
GCCTGCCTGC CGAATCTGAT GGCCCGGCGC GGCTACAGCA CCGTCGCGGT GCATGGCTTC
TCGGGCGGCA TGTTCGAGCG CGAACACTGG TATCCGACCA TCGGCTTCGA CCGCTCGCTG
TTCGGCGAGA AGCTGCTCAA AGCCACCGGT CGCGAATGCG GCGCCGCCTT CCGCGGCGTA
TGCGATGCGG ATTTCGCGCC GCTGATCGCA GCGGCGTCGC GTGACGCCGA CGCCGGCGGC
AAGCCGCGCT TCATCTATTG GCTGACCCTC ACCAGCCACG TGCCGATCGC GCCCAATGCC
GCCCGGACAG ACTTTCACTG TGGCGACGAT AGCGGCAGTT TCGGTCATCT CGACGTCTGC
CGCATGGCTG AACTCTGGCA CGACGTGTTC GAGGGGGTCG CCCAGCTCGC ACACGATCCT
GCTTTGGGAC AGCCCGAGAT CCTGATGGTC GGCGACCACG GACCGCCATT GTGGTCGAAG
CGCGGCCGCG CCCAATTCGA ACCCGGTAAG GTCGCGTGGT ACAGGCTGCA ACCGCGCAAG
AGATCAGAGG CGCGGCTCGA GCGGGCGGGG AACAAGGCGA CGGCAACAAG CGTTGCGGTT
ACGACGCGCG ACCGCTTGGA TTGA
 
Protein sequence
MPIPSIADYS TAIDGRLLAA RSARFVHANI RLIAGGLLIP NLLSLATMIS LIDIGLPPRT 
EAILFYACVA MLARRLPFVI IVPLFLTVLS FDIVRTLSLM FSVAPVEFLE AIDRAQRIQF
FASPLYVALI VTIAATTVAA LVCLSRRSAL TNASAPAFFV LALGVAAIDF IGNVSPHYHF
GATIGFEQPV QSAAEASGFK QTAGAEGRNV VLVMVESLGY LRDPAARQRI AAPLYDPALT
RDYAVTSGQT VYYGSTTSGE MRELCDTRSF YKDFVQHDTD ACLPNLMARR GYSTVAVHGF
SGGMFEREHW YPTIGFDRSL FGEKLLKATG RECGAAFRGV CDADFAPLIA AASRDADAGG
KPRFIYWLTL TSHVPIAPNA ARTDFHCGDD SGSFGHLDVC RMAELWHDVF EGVAQLAHDP
ALGQPEILMV GDHGPPLWSK RGRAQFEPGK VAWYRLQPRK RSEARLERAG NKATATSVAV
TTRDRLD