Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3237 |
Symbol | ppnK |
ID | 4023746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3591765 |
End bp | 3592544 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637963441 |
Product | inorganic polyphosphate/ATP-NAD kinase |
Protein accession | YP_570363 |
Protein GI | 91977704 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0061] Predicted sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0627162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGT CCCCGCGGCG AGACCGCATC GCCTTCGTCG CGAGCCCGAG CGCGGAAGCG CAGGCGGCGC AGGCGCAGCT CGTGTCGATG TACGGCACTT GCGATCCGCA GGATGCCGAT GTCGTGGTGG CGCTCGGCGG CGACGGCCTG ATGCTGCAGA CGCTGCATCA GCAGATGCGC AGCGGCAAGC CGATCTACGG GATGCATCGC GGCACGGTCG GCTTCCTGAT GAACGAATAC GCCACGCACG ATCTGCACAG CCGGCTCGAA GCCGCGCGCG AGACCGTGAT CCATCCGCTG CTGATGCGCG CCACCGATAT CTACGGCGAA GTGCACATCC ATCACGCGAT CAACGAGGTT TCGCTGTTTC GCCAGAGCCA TCAGGCGGCG CGGCTGCGCA TCATCATCGA CGAACGCGAG CGGATGAGCG AACTCGTCGC CGATGGAATC CTGGTTGCGA CGCCGGCGGG CTCGACCGCG TATAATCTTT CGGCGCAGGG CCCGATCCTG CCGATCAGCG CAGCCTTGCT GGCGCTGACG CCGATCTCGG CGTTCCGGCC GCGGCGCTGG CGCGGCGCGC TGCTGCCGGA CAACGCCTTC GTGGTGATCG AAGTGCTCGA AGTCGACAAG CGCCCGGTCG CGGCGGTGGC CGATCACGAC GAGGCGCGGG ACGTGCGCCG GGTCGAGGTG ATTTCCGACA AGACGATCGC GATCCGGATG CTGTTCGACC CCAGGCACAG CCTCGAGGAA CGCATCCTCT CGGAGCAATT CGGCACCTGA
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Protein sequence | MSTSPRRDRI AFVASPSAEA QAAQAQLVSM YGTCDPQDAD VVVALGGDGL MLQTLHQQMR SGKPIYGMHR GTVGFLMNEY ATHDLHSRLE AARETVIHPL LMRATDIYGE VHIHHAINEV SLFRQSHQAA RLRIIIDERE RMSELVADGI LVATPAGSTA YNLSAQGPIL PISAALLALT PISAFRPRRW RGALLPDNAF VVIEVLEVDK RPVAAVADHD EARDVRRVEV ISDKTIAIRM LFDPRHSLEE RILSEQFGT
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