| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3147 |
|---|
| Symbol | |
|---|
| ID | 4023652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3499206 |
|---|
| End bp | 3500078 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637963348 |
|---|
| Product | LysR, substrate-binding |
|---|
| Protein accession | YP_570274 |
|---|
| Protein GI | 91977615 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.873813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.524387 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGA CATCGGCGCG GATGCGCGCA GTGAACGCGG TGTTCGAGAC CGGCAGCTTC
GCCGCGGCCG CGCGCCACAT CGGCGTGTCG CAATCGGCGA TCGCTCAATT GGTCCGCGAG
CTGGAGGCCG CATTCGATGT GGCGCTGTTC GAACGCCACG GCGCCAGTCT GATCCCGACC
GCATTGTGCC GCCAGCTCTA CGGCGCCACC TGCAAGATAC AGGCGGTCGA GGCCGACGCG
TTGTCGATCC TGCAGCAGCG CGGCGAACCG GCGGGCGGCG AGCTCCGCGT CGGCCTCGGC
AATTCGATGC CCGGCATGGC GCTGATTGCG GCGTTCAAGC GGCTGTATCC CAAGGTGCAG
ATCGCGATCG AGATCGGCAG TTGGTCGGCG ATCGTCGCCG CGGTGGTCGA GCAGCGCGTC
GATATTGGCG TGCTGCCCGA AGTGCCGGCG GACACCCGCT TCCGCCGCGA GATCTGTCTG
CAGCAGCGCG TCGTCGCGCT GTGCCATCCC GGCCATCCGC TGCAGCGGCG CAAGCAGGTC
GCGATCGCCG AGCTGACGCA ATATCCGCTG GTGTTCCGGT CGCGCGATTC CTCGACGCAG
CGCACCGTCG ACCGCGCCTT TCGCGAGATC GGCTTGCGTC CGGCGCCGTC GCTGATCGTC
AACACCCGCG AAGGGATGCT CGAAGCCGTC GCCAATCAGC TCGGCATCGG CTTCATGTGG
GAGCAGGGCT CGAGCCGACG CGACGGCATC GCGCGAATCC CGGTGCCGGA GCTGGATGCG
GAAGTGCCGG AATGCATCTT CGCGCTCGCC GGCAAGAAGG GCCGCCTGGT CGAACTGTTC
TTCCTGGCGC GCGGCACGCC CGACATCGCG TGA
|
|---|
| Protein sequence | MALTSARMRA VNAVFETGSF AAAARHIGVS QSAIAQLVRE LEAAFDVALF ERHGASLIPT
ALCRQLYGAT CKIQAVEADA LSILQQRGEP AGGELRVGLG NSMPGMALIA AFKRLYPKVQ
IAIEIGSWSA IVAAVVEQRV DIGVLPEVPA DTRFRREICL QQRVVALCHP GHPLQRRKQV
AIAELTQYPL VFRSRDSSTQ RTVDRAFREI GLRPAPSLIV NTREGMLEAV ANQLGIGFMW
EQGSSRRDGI ARIPVPELDA EVPECIFALA GKKGRLVELF FLARGTPDIA
|
|---|
| |