Gene RPD_3143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3143 
Symbol 
ID4023648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3497123 
End bp3497503 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content61% 
IMG OID637963344 
Producthypothetical protein 
Protein accessionYP_570270 
Protein GI91977611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.511096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.499119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGG TCTACACGCC GAGCGAGATG AACGAGACAT TCGCGCGAGC GTTCAACAGC 
AGGACACTCG AAAACCTCGT TTCGCTGTAC GAGCCGAATG CAATTCTCCT GGTGGATGAA
AGCGGTGAAC GCGCCGCCGG TCTCGAGGCG ATCGGCCGCG AACTCGCCAA GCTGCTGCAA
GCGCCGGGAA CCATGGTGTC CAAGAATAAT TTCTGCGTCG TTCTCGGTGA TATGGCGCTG
CTGCGCGCCG ATTTCGTCTT GCGCGACGGC GCAACTGTCG TCGCTTCGGG CAGCACGGCC
GAAGTGATCC GCCGGCAGGC CGACGGTTCA TGGCTCTACG CGATCGACCA TGCAGCCGGC
GCGAGCCTGC CGTCGGTTTG A
 
Protein sequence
MFKVYTPSEM NETFARAFNS RTLENLVSLY EPNAILLVDE SGERAAGLEA IGRELAKLLQ 
APGTMVSKNN FCVVLGDMAL LRADFVLRDG ATVVASGSTA EVIRRQADGS WLYAIDHAAG
ASLPSV