| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3130 |
|---|
| Symbol | |
|---|
| ID | 4023635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3482974 |
|---|
| End bp | 3483510 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637963331 |
|---|
| Product | transposase and inactivated derivatives |
|---|
| Protein accession | YP_570257 |
|---|
| Protein GI | 91977598 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0127624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.415202 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTGTT ATCGACGAAA TCGTTTGGCA GGAGGGACGT TCTTCTTCAC CGTCACGCTG
ACGGATCGTC GATCGTCAGC CCTGATCGAT CATGTCGCTG ATCTCCGGAC GGCTTTCCGG
CTCGCGCGCC GCGAGCGGCC GTTCTTCCTG GACGCGATCG TCATCCTTCC CGATCATCTG
CACGCCGTCT TCACGCTGCC GCCCGGTGAC CCCGACTTTT CCGGACGGTG GCGGCGCATC
AAAGGGCATT TCAGCAGCGC CCTGATCCAG AAGGGCGTGC CGCTGGGGCG GCATCCGAAC
GGCGATCTTG CGCTGTGGCA GCGTCGGTTT TGGGAGCATA CCATCCGCGA CCAGGACGAT
TTCGCCCGCC ACCTCGCCTA CATCCACTTC AACCCGGTCA AACACGGCCT GACGTCTCGG
GTTGTGGATT GGCCCTATTC GTCGTTTCAT CGCTCCGTGA GGGAAGGCAT TCTGCCCGCC
GACTGGGCCG GAAACGTAAG CGATACCAGC GGCGACTTCG GCGAGTCGAT GAATTGA
|
|---|
| Protein sequence | MVCYRRNRLA GGTFFFTVTL TDRRSSALID HVADLRTAFR LARRERPFFL DAIVILPDHL
HAVFTLPPGD PDFSGRWRRI KGHFSSALIQ KGVPLGRHPN GDLALWQRRF WEHTIRDQDD
FARHLAYIHF NPVKHGLTSR VVDWPYSSFH RSVREGILPA DWAGNVSDTS GDFGESMN
|
|---|
| |