| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3103 |
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| Symbol | |
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| ID | 4023608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3447856 |
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| End bp | 3449544 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963304 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_570230 |
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| Protein GI | 91977571 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0304891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA CTCCTCGTCC GGCCGCCGCC CCCGAAGATT ATGCCGACGT CCTTGCGCGG
TTTCGCCGCG ACGACCTCGA GGCCCTATTC GACGGCAATT TCGCAACCGG CCTCAACGTC
TGCGTCGAAT GCTGCGATCG CCACGTCGAA GGCGGCGGCA TTGCGCTCGA TTGGGAAAGC
CAGGACGGCC GCACCGCCTC CTTCACTTTC GCCGAGATGA AGGACTATGC CGCCCGCGTC
GCCAACCTGC TGGTGGCGCA GGGCGTCAAA CCCGGCGACG TGGTCGCCGG CATGTTGCCG
CGGACGCCCG AATTACTTGC CTTGATCCTC GGCACCTGGC GCGCCGGCGC CGTCTATCAG
CCGCTGTTCA CCGCCTTCGG ACCCAAGGCG ATCGAGCACC GCCTCAAAAT GAGCGCCGCC
AAGCTGGTGG TCACCGACCT CGCCAACCGG GCCAAGCTGG CCGACGTCGT CGACTGCCCG
ACCGTCGCGA TCGTCACGCG CCCAGGTGAA AGCGCCCCGC TCGGCGACCT CGATTTCCAC
GCCGAGATCG CTTCGAAATC CACACAGTTC GAGCCGGTGC TGCGCAAAGG CAGTGACCTG
TTCCTGATGA TGTCGACGTC GGGCACCACC GGCCTTCCCA AGGGCGTGCC GGTGCCGATC
GACGCGCTGC CGGCGTTCTA TTCCTACATG CGCGACGCGG TCGACCTGCG CCCGGACGAC
ATCTTCTGGA ACATTGCCGA TCCCGGCTGG GCCTACGGGC TGTACTACGC CGTCACCGGT
CCCTTGCTGC TCGGCCACGC GACCACCTTT TTCGACGGGC CGTTCACGGC CGAGAGCACC
TACGGCCTGA TCAAGCGCCG CGGCATCACC AATCTCGCCG GCGCCCCCAC CGCCTACCGA
CTGCTGATTG CGGCGGGTCC GGCGATGGCA GCTCCGGTGA AGGGCCAGCT TCGCGTCGTC
AGCAGCGCCG GCGAGCCGCT GAACCCGGAA GTGATTCGCT GGTTCGCCGA ACATCTCGGC
GCGCCGATCC ACGATCATTA CGGCCAGACC GAGCTCGGCA TGGTGGTCAA CAATCACCAT
CGCCTGCGCC ATACCGTGCA TCCAGGCTCG GCGGGTCTTG CCATGCCCGG CTTCCGCGTC
GCGGTGCTCG ACGACGACAG TCGCGAACTG CCGGCTAACG TGCCGGGCAT TCTCAGCGTC
GATCTCGCCC GCTCGCCGCT GATGTGGTTC TCTGGCTATT GGCAGCAGGA CACTCCCGCC
ATCGCCAACG GCTATTACCG CACCGGCGAC ACCGTGGAGA TGGAACCCGA TGGCTCGATC
AGTTTCGTCG GCCGCTCCGA CGACGTCATC ACTTCGTCGG GCTACCGGAT CGGTCCATTC
GACGTCGAAA GCGCGCTGAT CGAACACCCG GCGGTGATCG AGGCGGCGGT GATCGGTAAG
CCTGACGCCG AGCGCACCGA AATCGTCAAA GCCTATGTGG TACTGGCCAA TGACGTCGAA
CCCACCGACC AACTTGCCGA GGAGCTGCGC CAATACGTCA AGAAGCGGCT CTCCGCCCAC
GCCTATCCGC GCGAGATCGA ATTCCTGGAG CAGTTGCCGA AGACACCGAG CGGCAAACTG
CAGCGGTTCA TTTTGCGCAA GCGCGATGTC GACCAGAGCA AGGATGCGCC GGCCCCGTCG
GCGCACTGA
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| Protein sequence | MSNTPRPAAA PEDYADVLAR FRRDDLEALF DGNFATGLNV CVECCDRHVE GGGIALDWES
QDGRTASFTF AEMKDYAARV ANLLVAQGVK PGDVVAGMLP RTPELLALIL GTWRAGAVYQ
PLFTAFGPKA IEHRLKMSAA KLVVTDLANR AKLADVVDCP TVAIVTRPGE SAPLGDLDFH
AEIASKSTQF EPVLRKGSDL FLMMSTSGTT GLPKGVPVPI DALPAFYSYM RDAVDLRPDD
IFWNIADPGW AYGLYYAVTG PLLLGHATTF FDGPFTAEST YGLIKRRGIT NLAGAPTAYR
LLIAAGPAMA APVKGQLRVV SSAGEPLNPE VIRWFAEHLG APIHDHYGQT ELGMVVNNHH
RLRHTVHPGS AGLAMPGFRV AVLDDDSREL PANVPGILSV DLARSPLMWF SGYWQQDTPA
IANGYYRTGD TVEMEPDGSI SFVGRSDDVI TSSGYRIGPF DVESALIEHP AVIEAAVIGK
PDAERTEIVK AYVVLANDVE PTDQLAEELR QYVKKRLSAH AYPREIEFLE QLPKTPSGKL
QRFILRKRDV DQSKDAPAPS AH
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