| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3102 |
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| Symbol | |
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| ID | 4023607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3446710 |
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| End bp | 3447702 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963303 |
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| Product | helix-turn-helix, AraC type |
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| Protein accession | YP_570229 |
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| Protein GI | 91977570 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0110134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGGC GGACGATTTC ACCTCTGTTC GTAGAAGAAG TTTCGGATTG CCTGCGCCGC
GCCGGCATTT CGCCTGGGCC GGTGCTGGCC TCCGCGGGCC TGCCCCAGAT CGTTCGCGAG
CGGGTGTCGG CCGCGCGATT TGGCGCGCTG TGGCTAGCGG TGGCGGCGGC GATGAACGAC
GAGTTCTTCG GCCTCGGCGG GCGACCGATG CGACCGGGCT CGTTCACGCT GCTCTGTCAT
GCCGTGCTCA ATGCCCCGAC GCTGGAGCAG GCGCTCAACC GGGCACTCCG ATTCCTGAAG
GTGGCGCTGG ACGATCCTTG CGGCGTGCTG CAGGTCGAAG GCGACATCGC CCGCATCGTG
TTGAAAGACA AGGGCGCGCC GCGCTCGGCG TTTGCCTATC GCACTTTCTG GATCGTGGTG
CATGGCCTCG CCTGCTGGCT GGTGGGCCGG CGCCTGCCGC TGCGGCGGGT CGATTTCGCC
TGCCGGCCGC CGGAGTTCGC GGCGGACTAT CGGCTGTTTT TCGGGGCGTC GGTCAGGTTC
GGCCAGCCAG AGAGCGCGTT GGCGTTCGAC GCCGCCTATC TCAAACTCCG CCCCAACCGC
ACAGAACGGG CGCTGAAGGA ATTTTTGCGG CGGGCACCGG CCAACATCCT GGTGCGCTAC
CGCCACGACG CCACCCTCAC TGCGGCAATC CGAAATACGC TGCGGGCGCG ACCGCCGACA
GCGTGGCCGA ACTTCGAGAC GCTGGCGAAA CAAATGAAGA TACCGGCCTC CAGTTTGCGC
CGCCGGCTGC GCGCAGAGGG ACAAACCTAC CAGACCATCA AGGATGAGAT ACGCCGGGTT
CTCGCCATTC GATGGCTGGC GGAGAACGAA AAGCCGGTGG GCGACATCGC CGCTGACCTC
GGCTTTGCCG AGCCCAGCGC TTTCCACCGT GCCTTCCGAA AGTGGATGGC GAAAAGCCCA
GGCGCCTTCC GCCGCGAGGC GCTGGTTGGG TGA
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| Protein sequence | MERRTISPLF VEEVSDCLRR AGISPGPVLA SAGLPQIVRE RVSAARFGAL WLAVAAAMND
EFFGLGGRPM RPGSFTLLCH AVLNAPTLEQ ALNRALRFLK VALDDPCGVL QVEGDIARIV
LKDKGAPRSA FAYRTFWIVV HGLACWLVGR RLPLRRVDFA CRPPEFAADY RLFFGASVRF
GQPESALAFD AAYLKLRPNR TERALKEFLR RAPANILVRY RHDATLTAAI RNTLRARPPT
AWPNFETLAK QMKIPASSLR RRLRAEGQTY QTIKDEIRRV LAIRWLAENE KPVGDIAADL
GFAEPSAFHR AFRKWMAKSP GAFRREALVG
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