Gene RPD_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3092 
Symbol 
ID4023596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3436386 
End bp3437255 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content71% 
IMG OID637963292 
Producthypothetical protein 
Protein accessionYP_570219 
Protein GI91977560 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0274905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGGC GCAACCGCCG CGGCGCGCTG CGGGCGATCC TGTCGGGATC GGCCTGCGTG 
CGGCCGGCGT CGGTGTATGA CGCGATCTCG ATCCGGATCG CCGACGATCT CGGCTTTCCG
CTCGGGATGT TCGGCGGCTC GGTGGCGTCG CTGGCGATCC TCGGCGATCC TGATATCGCG
CTGATCACGC TGACCGAGCT TGCCGAGCAG ATGCGGCGGA TGGCGCGCGC GGCCGCGCTG
CCGGTGCTGG TCGACGCCGA CCACGGCTAC GGCAACGCGC TCAACGTCCG CCGCACCGTG
CAGGAATTGG AAGCGGCCGG CGCCGCCGGT CTCACCATCG AGGACACGCT GCTGCCGCAG
GCCTATGGCG AGGCCAGCCC GCAACTGATC TCGCGCGAGG AGGGGCTCGG CAAGATCAAG
GCCGCGCTCG ATGCAAGGCT CGATCCGTCG CTGGTGATCG TCGGCCGCAC CGGCGCCTGC
GCGATCACTT CGCTCGACGA CGCGATCGAT CGCGCGGTGG CCTATCAAGC CGCCGGCGTC
GACGCACTGT TCTTCACCGG CGTGAAGACG CGGCCGCAAC TCGATGCGAT CGCTGCTGCG
ACGACGCTGC CGATCGTGCT GGGTAGTCCG CCTGCGGAGC TCACCGATTG GGACTATCTC
GCCGCGCAGC GGGTGCGGAT CGCGGTGCAG GGCCACGCGC CGATCGCCGC GGCGACCGAA
GCCGTATCCA AGGCGTTGTC GGCGCTCCGC GATGGCGCGG CGCCGAAGCA GCTCACCGGG
CTCGCCTCGG CCGAGCTGAT CGACCGCGTC ACCCGCGCGT CGCTGGTCGA AGAGCGCGGC
GCGCAGTTTC TGGGGCTGAA GCGCGAATGA
 
Protein sequence
MAWRNRRGAL RAILSGSACV RPASVYDAIS IRIADDLGFP LGMFGGSVAS LAILGDPDIA 
LITLTELAEQ MRRMARAAAL PVLVDADHGY GNALNVRRTV QELEAAGAAG LTIEDTLLPQ
AYGEASPQLI SREEGLGKIK AALDARLDPS LVIVGRTGAC AITSLDDAID RAVAYQAAGV
DALFFTGVKT RPQLDAIAAA TTLPIVLGSP PAELTDWDYL AAQRVRIAVQ GHAPIAAATE
AVSKALSALR DGAAPKQLTG LASAELIDRV TRASLVEERG AQFLGLKRE