Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3090 |
Symbol | |
ID | 4023594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3435312 |
End bp | 3435854 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637963290 |
Product | MarR family transcriptional regulator |
Protein accession | YP_570217 |
Protein GI | 91977558 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.742362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0240914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCAA CGACTTCGGT CGCCACCAGC GATATTGACA GCATACTGCC AATATGGCAG TATGCTGTCA TGATAGATTC ATACGACGAT CCGTTCGACA ATGACGTCAA CGCCCTGGTG CTGGAGATCT TCCGGCTCAA TGGCGCGCTG GTCCGGTTCG GCGACACGCT CGTGAAGCCG CTCGGTCTCA CCAGCGCGCG TTGGCAGGTG CTGGGATCGA TTGCGCACGG CCGGGGCACG TTCTCGGTCG CTCGCCTGGC CGACAATATG GGCCTTGCCC GCCAATCGGT GCAGCGGATC GTCGACGAAT TGGCCGAGGC GGGGCTGGTC GGCTTCGAGC CCAATCCGGC GCACAAACGG GCGAAGCTGG TGGTGATGAC GTCGCGGGGC GAGCGGGTGT TCGAACGCGC CTCGCAGGCG TGGCGGCCGA TCGCCGAGAC CTTGGCGGCG CAGATGCCCG CCCGCCAACT TCGAAAGACC ACCGAAAACC TGGCCGCATT GCGCGGCCAG TTGGAAGTTC AAAGTGACAG GAGTTCAGAA TGA
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Protein sequence | MPATTSVATS DIDSILPIWQ YAVMIDSYDD PFDNDVNALV LEIFRLNGAL VRFGDTLVKP LGLTSARWQV LGSIAHGRGT FSVARLADNM GLARQSVQRI VDELAEAGLV GFEPNPAHKR AKLVVMTSRG ERVFERASQA WRPIAETLAA QMPARQLRKT TENLAALRGQ LEVQSDRSSE
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