| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3054 |
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| Symbol | |
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| ID | 4023557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3398496 |
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| End bp | 3400430 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963253 |
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| Product | glycosyltransferase |
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| Protein accession | YP_570181 |
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| Protein GI | 91977522 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGC CGCCGATCTG CAGAGGACGA CGCACCATCA AGCGCAAGCA GCCCAAGAAC
CGTCGACCGA AGAAGAAGCA TCAGGGCGGC CGGAGCCAAG CGGGCTCAGT CGCCAGTTCG
GCGGCAACGC CTGCTTCTTC CGACGCCGCA GCCCCAGCCG CGCCCGGCGA TACCGCCGTT
GCGCCTGCGC CTGCTGCTGC TGCGCCGCCG CCGGCTGCTG CGAACAAGGC CGAGCGCGCG
CCGGTCCGCC CTGCTCCCGT CGGTCACAAG CGCTCCGCTC CGCCGCCGAA GCCCGCGCAA
TACAAATCAG CCCCCCGCCA ACCGGCCGCG CTGCCGACGC CGAACAGTCC AGCCGCCAAA
CCGGTCGCCG CAGCGCCTCC CGGTCTGTTG CTCAGCGCCT GCGACACCGT GCTGCAGATC
CTACGCAACG AGCCGCGGCG GCTGTTGCTG TGGATTCTCG GCATCTATGG CGGGCTGTGG
TTCGCAGCCG CAATCAGCTT CCCGAGCCTG CCTGCCGTCA GCTACGAGAT GGCGCTGTTC
GGCAAGGAAC TGGAGGCCGG ATACTGGAAA TATCCGCCGC TCGCGCCGTG GCTGACCGAG
ATCGCCGCAC TGCTGACCGG CCGCTGGGAC GGCTCGCAAC TCGTCCTGTC GATCGGCTCG
GCGCTGGCGG CGCTGGTTCT GGTGTGGCGG CTCGGCGCCG GCATCGTCGG TCATAGCGGC
GCGACGCTGG CGGTGGCGCT GACTATCCTG ATCGGCTGTT TCGGCCCGCA GGTCACCGCC
TTTGATCCGG CGATCGCCAG CCTGCCACTC GTGGTCGCGG CGGTGGCGCT GTATCGCAAA
GCGGTGCTGG GCCAGGCGCG CTGGAGCTGG GTCGGGCTCG GAATCGTCTG CGCGCTCCTG
GCGAACGCGA ACCACGCCGG TTTCGCTTTG ATGCTGGTCC TCATCGGACA TTTGTTGCTG
ACGCGCGAGG GCCGCCGCCA TCTGCTCACC GCCGGCCCCG CGATCGCGGC GTTGGCCTGC
TTCGTCGTGC TGCTGCCGCA TCTGATGTGG CTAGCGCAGA TGAACGCGGC AGGAACTCTC
ACGCCCGTGG TTCATGCGTC CGATCTCTTG TCGCGGATCG CGACGGCCTT TGCCTTCGTA
TTCGGCCAAG CGGGCTTGCA CCTCGGTTTG ATCCTGGTGG CGGTGCTGGC GATGCTGCCG
CGGGTCCCGC TGCAAGGCGA ACCCGCCGTC CTCCAGCTCG AGGCGCCGAC CGGGTTCGAT
CGCTCGCTGA TCCTCGCCGC CGCCTTTGTG CCATCGCTGC TGGTTGCGGC CGGCAGCGTG
GTCGGATGGT TCACGATCGG CGCCTACACC GGCAGCGCGC TGGTGGCGTT GTCGGGTCTT
GCGCTCGTCC TGCTGCTGCC ACCGCAAATC GTGCTGCGCG CGCCGCGCCT CGCGGTGGTG
GTGTGGCTGC TGGTCCTGAT CGGCGTGCCG TTCGGCGCCA CCGCATCGAT CTATTCGAAA
GCCTATGGCA GCGGCCCGCT GCCGACCGAG CTCTACCCCG CGCGAGCGCT GTCAAATGCG
ATGCAGGCCG TCTGGAAGAG CCGCACCACC CGGCCGCTCG ACATCGTCAC CGGAAGCACC
CGGCAGGCCG GATTCGTCGC GCTCACCGCG TCGCCGCGGC CGTCGGTGTT CATCGACGCG
GATTTCGCCA AGAGCCCGTG GATCACGCCT GACCGGCTGA AACAATCCGG CACACTGGTG
GTGTGGTCGA CCGACGAATT CGCACGGACC GATGAAATAC CGGCACCGTA TCGCAGCGCG
CTCGGAGCGG CCGCGCCGCT GTTTGGCACC ATGGTGCTAC CGCTCGGCCG CGGCAAACTG
AAGGCCTATG GCTGGGCGAT GATCGCGCCC GACGGCGTCC AGCTGCCGGC GGCAGCACCG
CCTGCTCCCA AATAA
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| Protein sequence | MTAPPICRGR RTIKRKQPKN RRPKKKHQGG RSQAGSVASS AATPASSDAA APAAPGDTAV
APAPAAAAPP PAAANKAERA PVRPAPVGHK RSAPPPKPAQ YKSAPRQPAA LPTPNSPAAK
PVAAAPPGLL LSACDTVLQI LRNEPRRLLL WILGIYGGLW FAAAISFPSL PAVSYEMALF
GKELEAGYWK YPPLAPWLTE IAALLTGRWD GSQLVLSIGS ALAALVLVWR LGAGIVGHSG
ATLAVALTIL IGCFGPQVTA FDPAIASLPL VVAAVALYRK AVLGQARWSW VGLGIVCALL
ANANHAGFAL MLVLIGHLLL TREGRRHLLT AGPAIAALAC FVVLLPHLMW LAQMNAAGTL
TPVVHASDLL SRIATAFAFV FGQAGLHLGL ILVAVLAMLP RVPLQGEPAV LQLEAPTGFD
RSLILAAAFV PSLLVAAGSV VGWFTIGAYT GSALVALSGL ALVLLLPPQI VLRAPRLAVV
VWLLVLIGVP FGATASIYSK AYGSGPLPTE LYPARALSNA MQAVWKSRTT RPLDIVTGST
RQAGFVALTA SPRPSVFIDA DFAKSPWITP DRLKQSGTLV VWSTDEFART DEIPAPYRSA
LGAAAPLFGT MVLPLGRGKL KAYGWAMIAP DGVQLPAAAP PAPK
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