Gene RPD_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3053 
Symbol 
ID4023556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3398035 
End bp3398379 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content65% 
IMG OID637963252 
Producttype IV pilus assembly PilZ 
Protein accessionYP_570180 
Protein GI91977521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC GGCGGAAATC CCGGCGGGAC AAGGTGGTCT ATGGCGGCGT CGCCGCGATC 
AACGAGCGCG GCTCGACCCG CGACTGCGTT GTCCGGAACA TCTCGGACAA CGGCGCCACG
ATCGAATTCG GCACCGCCGC GGGGCTCTCG GACCAGATCG CGCTGACCGT CGCCAAGAAG
GCGCGCACCT ATCCGTCGAA GATCGTCTGG CGCCGCGGCA ACACGGTTGG ATTGGCTTTC
AGCGAAACGA CCGATGCCAG CCAGCTCAGC GAGCGCTTAC GCAAGAGCGA GAAGACCAAG
CGCGAGCTGC AGCGCAAGAT CAAGGTGCTG CTCGGCGAGT CCTGA
 
Protein sequence
MDDRRKSRRD KVVYGGVAAI NERGSTRDCV VRNISDNGAT IEFGTAAGLS DQIALTVAKK 
ARTYPSKIVW RRGNTVGLAF SETTDASQLS ERLRKSEKTK RELQRKIKVL LGES