Gene RPD_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3052 
Symbol 
ID4023555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3396994 
End bp3397926 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID637963251 
Producthypothetical protein 
Protein accessionYP_570179 
Protein GI91977520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA CCCGCGCGCC CACCGGCTTT GCGTCCGAGG ACGACGTTCC GATCCCCTAC 
ATGGCGCGGA CCCGCGCTTA TTATCAGGCG ATCGGCTACG ACGTTCCCTA TCGCTGGGCG
CATGATGTCG CAGCGCCGTT CCGGCCGCTG ACGAAGCCGC TGGCGCAGGC GCGCGTCGCG
CTCATCACAA CCGCCGCTCC GTTCGATCCG GCGAAAGGCG ACCAGGGCCC CGGCGCGGCA
TATAATGGCG GCGCCAAGTT CTATCAGGTC TATGACGGCG ATACCTCGCA GGATCACGAT
CTGCGCATTT CCCACATTGC CTATGACCGC ACCCACACCA CCGCGACCGA CAGCGGCAGC
TGGTTTCCGC TGCCGCAATT GCGGCGGCTG GCGCGCGAGG GCGCAATCGG CGACGTCGCG
CCGCGGTTCT TCGGCGCGCC GACCAATCGC AGCCACCGCG TCACGACCGA CACCGACGCC
CCCGAGATCC TGGCGCGCTG CCGTGCCGAT AACGTCGACG CTGCGGTGTT GGTGCCCAAT
TGTCCGGTCT GTCACCAGAC CGTGTCGCTG GTCGCGCGGC ATCTCGAGGC CCACGGCGTC
TCGACCGTGG TGATGGGGTG CGCGAAAGAC ATCGTCGAGC ACGCCGCCGT GCCGCGGTTC
CTGTTCAGCG ATTTCCCGCT CGGCAATTCC GCCGGCAAGC CGCACGACGA CGCCTCCCAG
GCGTTCACAC TCGAGCTGGC GCTGCGGGTG CTGGAGCGCG CGCCGGGGCC GCAGACCACC
GTGCAATCGC CGCTGCGCTG GCGCACCGAC GCCGCGTGGA AGCGCGACTA CAACAACGTC
GCCGCCATGA GCGCCGACGA ACTGGAGCGG CGACGCTGCG ATTTCGAGGC CCAGAAGGAC
CGCGCCCGCG CCATCCGCGA CAGCGTCGCA TAA
 
Protein sequence
MAETRAPTGF ASEDDVPIPY MARTRAYYQA IGYDVPYRWA HDVAAPFRPL TKPLAQARVA 
LITTAAPFDP AKGDQGPGAA YNGGAKFYQV YDGDTSQDHD LRISHIAYDR THTTATDSGS
WFPLPQLRRL AREGAIGDVA PRFFGAPTNR SHRVTTDTDA PEILARCRAD NVDAAVLVPN
CPVCHQTVSL VARHLEAHGV STVVMGCAKD IVEHAAVPRF LFSDFPLGNS AGKPHDDASQ
AFTLELALRV LERAPGPQTT VQSPLRWRTD AAWKRDYNNV AAMSADELER RRCDFEAQKD
RARAIRDSVA