| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3031 |
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| Symbol | |
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| ID | 4023534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3376534 |
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| End bp | 3377802 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637963230 |
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| Product | DNA processing protein DprA, putative |
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| Protein accession | YP_570158 |
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| Protein GI | 91977499 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.461494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.318128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGCC GCCGCAGATC TTGGCGCGTG GTCTCATCAG GACCGAAGTA CCACCGCCGA
CCCTCCCGCC CCGCCTTCAT CGAACTTGCC CACACCTATA AGTTGCGCAA CACTCGCCTT
TCGGAGGTGG GCGTGAGTGA CAGCGGCGGA AACCAAGGCA CTACGCGCCT CACCGAGGCG
CAGCGGATCG ACTGGCTGCG GCTGATCCGC GCCGACAATG TCGGGCCGCG CACCTTTCGC
TCGCTGGTCA ATCATTTCGG TTCGGCGCGC GCCGCGCTGG AGCGGCTACC CGAACTCGCC
CGCCGCGGCG GCGCAGCGCG GGCCGGTCGC ATTCCCAGCG AAGACGAGGC GCGCCGGGAG
ATCGATGGCG GCCACCGGCT CGGCGTCGAA CTGGTCGCGC CGGGCGAACC CGGCTACCCG
CCTCGCCTCG CGCTGATCGA CGACGCGCCG CCGCTGCTCG GAGTTCATTG CGTGCCCGAT
GCGCTCGCCG AGATGCAGCG GCCAATGATC GCGATCGTCG GCTCGCGCAA CGCCTCCGGC
GCCGGATTGA AATTCGCCTC CGAACTCGCG CGCGATCTCG GCGCCGCCGG CTTCGTGGTG
ATCTCGGGAC TGGCCCGCGG CGTTGATCAG GCTGCGCATC GCGCGAGCCT CGCCAATGGC
ACGGTCGCCG TGCTGGCCGG CGGTCACGAC AAGATCTATC CGCCCGAACA CGAAGACCTG
CTGCTCGACA TCGTCGAGGC GCGCGGCGCA GCGATTTCAG AGATGCCGCT CGGCCACGTC
CCGCGCGGCA AGGATTTTCC CCGCCGCAAC CGGTTGATTT CCGGCGCGGC TGTCGGGGTC
GCGGTGATCG AGGCGGCCTA TCGCTCCGGC TCGCTGATCA CCGCCCGCCG CGCCGCCGAC
CAAGGCCGCG AGGTATTTGC CGTGCCGGGC TCGCCACTCG ATCCGCGCGC CGCCGGAACC
AACGATCTGA TCAAGCAGGG GGCGACGCTG ATCACCTCGG CCGACGACAT TATCCAGGCC
GTCGCCCCGA TCATGGACCG GCCGGTGGAA TTGCCGGGCC GCGAGCCGGA ACACCCGGCT
CCGGCGAGCG AGCCGGATGC CAGCCACCGC GGCCGTATCG TCAACCTGCT CGGGCCGAGC
CCGATCGGCA TCGACGATCT GATCCGGCTG TCCGGCATCC CGCCGGCTGT CGTGCGTACC
GTGCTGCTCG AACTGGAACT CGCCGGCCGC CTCGACCGCC ACGGCGGCGG ATTGGTGTCG
CTGCTCTAG
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| Protein sequence | MIGRRRSWRV VSSGPKYHRR PSRPAFIELA HTYKLRNTRL SEVGVSDSGG NQGTTRLTEA
QRIDWLRLIR ADNVGPRTFR SLVNHFGSAR AALERLPELA RRGGAARAGR IPSEDEARRE
IDGGHRLGVE LVAPGEPGYP PRLALIDDAP PLLGVHCVPD ALAEMQRPMI AIVGSRNASG
AGLKFASELA RDLGAAGFVV ISGLARGVDQ AAHRASLANG TVAVLAGGHD KIYPPEHEDL
LLDIVEARGA AISEMPLGHV PRGKDFPRRN RLISGAAVGV AVIEAAYRSG SLITARRAAD
QGREVFAVPG SPLDPRAAGT NDLIKQGATL ITSADDIIQA VAPIMDRPVE LPGREPEHPA
PASEPDASHR GRIVNLLGPS PIGIDDLIRL SGIPPAVVRT VLLELELAGR LDRHGGGLVS
LL
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