Gene RPD_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3011 
Symbol 
ID4023514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3355642 
End bp3356088 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content62% 
IMG OID637963210 
Producthypothetical protein 
Protein accessionYP_570138 
Protein GI91977479 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.438725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.345508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTGA AATCATTGTT CTGTGTCGTC GCCAGCGCTG GTGTGCTGGT AGCTTCCGCC 
GCCTTCGCCG GCGAATTCGG CACGGCCGAC GAAGCCAAGG CGATGCTTAC CAAGGCTGCT
GCCGCCGTGA AGGCCGATAA GGCCGCTGCG CTCGCGCAGT TCGCCAAGGG CGAGGGCGGT
TTCAAGGACC GCGATCTGTA TCCGTTCTGC GGCGGACCCG ACGGTGCGTT CACTGCGCAT
CCGACGCTGA ACGGCAAGAG CCTCAAGGAT CTCAAGGACA AGACCGGCAA GGCGCTGGGC
GAAGAGATCT ATGCCACGGC CAAGGAAGGC GAGGTCAAGG AAGTCAGCTA CATGTGGCCG
CGCCCCGGCC AGACCGATCC GGTTCAGAAG GTGAGCTTCG TCACCAAGGT CGGCGATCAG
ACCTGCGCGG TCGGCTACTA CAAATAA
 
Protein sequence
MKLKSLFCVV ASAGVLVASA AFAGEFGTAD EAKAMLTKAA AAVKADKAAA LAQFAKGEGG 
FKDRDLYPFC GGPDGAFTAH PTLNGKSLKD LKDKTGKALG EEIYATAKEG EVKEVSYMWP
RPGQTDPVQK VSFVTKVGDQ TCAVGYYK